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11-6858-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 172626 [Map]; Strand: w
      • AT1G01470.1 - [+] show detail - Late embryogenesis abundant protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G01471.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -625; Region: promoter
    Flanking Genome Sequence: 11-6858-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGC CGGCGCTGTG GAAAGTGAAA CTGATCTCAC 
    AGATCGGAAT CGAATGACTG TAAGGATTGG TGACAGAGAC TTTGGCCAAG 
    TACTCAACTG AGTCACAGGT TCACGTCTTT GAGGTCAACG TCCGTAACTG 
    AACCCTCCGG TTTAGGGATC GCGGTGAGTT TATCCGCCAC GAAGTCCTTG 
    GCTTTATCTA GCAAGCTCGC CATAATAACT CTTCTTGTTT AAATCTCTTT 
    GTTTTTGTTT CGGTGTTTTA GGTTTGTGTG TATGATATGA AGTTTAACTT 
    GGAATATATA TATATAAACG GATGGGATTA CGATGTTCTT ATGAAGTCGG 
    TATGATGTAA ATGGGTTAAA TTTTATAATG GTTTGTGTAC GTGTGAGGGT 
    TTTCCACGAG TGAGAGTGAA AGCGTGGGTT ATACGTGTCT TGTGCTTGAT 
    TTTTGATTTT TTTCGTTACA TGACAACAAT TATATTTCTT CAAAAAATAT 
    ATCATAATGA AAATAGATAT TTTGTTTGCA GTTATAGCTA AACTAGATAA 
    TTAAATACTT TTTGAGATAG TCACACGATA AATTTAATAC CAAAAAAATG 
    GAAAGTNTTN TACAAAACTA AAAGAGGGAA AAGTNTTCGC GTAAGGAATA 
    ANATGCGCAA GGGATTANTG GACCGACCAT GTCCCCCNTA TGCACNTNGG 
    GGGAATGTNN TANNNCTCCC NTGCG

AT1G01470.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein
Curator Summary
Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.
Computational Description
LATE EMBRYOGENESIS ABUNDANT 14 (LEA14); CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT2G46140.1); Has 340 Blast hits to 340 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 329; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01471.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR