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11-6866-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 904942 [Map]; Strand: c
      • AT1G03620.1 - [+] show detail - ELMO/CED-12 family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-6866-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT TTGCAGTGGC CGGAATCAAC ATCTCCTTCA 
    TGTTGATCCA AATGCTCGAT TTACAAAATA ATCGTAAGTT TCTTAAACTG 
    TCACCATTTT ATTCAGGTCA TACTTGTTAT TTTCACATAC GATTTCGATT 
    CTAAAAGGCN TTTAAATTCA TGTTTTGTTT TTTGTGCAGC AAAGCCAAAA 
    TGTCTTCCAG GAATGAATTT CCTCAAACTC TTAGAAGGTA AACAATAGGA 
    ATATGTTCTT TTAAACTGAA TAAAACCTTC TTTCTAAAAG TTAGTAGTGT 
    AGTATGACGA TCGCTAAATA ATCAAGAATC ATATTCCAAT GATTAACAGA 
    AGACGAGAGG GCATTCGATG TACTATACTG TATAGCTTTC GCGATGATGG 
    ATGCTCAATG GCTTGCAATG CACGCTTCTT ACATGGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 904977 [Map]; Strand: c
      • AT1G03620.1 - [+] show detail - ELMO/CED-12 family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-6866-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    TTGTTTTAAC AATAGCCTCC GGAAACAAAC CTTCACAATT TTTATTTGTA 
    TAAACACATT ATTTTGTGGA GCAAAGAAGT TCCCAAACCA TGATTATTAA 
    AAAAAGTTTA AGTATATATG AACATGTATT TACGAGTAAT TTACCGGATA 
    AGTTCTTGCA GAAAATAGTA AATTTTCTAG AGCGATAAAT CCGCAACCCC 
    TACAAAACAA ATGTTTAACA AAACAGGCGT CAACACTAAG TATTTTTCCT 
    TAAGATCTTT TTTGCAATAA GTTAAGTATA GATCAAATCT TACCTGAAAT 
    CGGTAGATGG ATTGGGACCT TGCCATCCCA TTTCTTTCCA TTGTTCTGTT 
    ACTAAACCCG TGAGATGAAC ATTCGGAAAC GCGACGTTCC ACAATGCTTT 
    AAGTGATTCC TGCCATTAAT CACGCAAATA TATTTCACAG AATT

AT1G03620.1

Model type
Protein coding
Short Description
ELMO/CED-12 family protein
Computational Description
ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT3G03610.1); Has 828 Blast hits to 828 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 41; Plants - 178; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
Link
InterPro Scan - TAIR