1. Home
  2. Mutant Lines
  3. 11-6899-1

11-6899-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19884406 [Map]; Strand: w
      • AT1G53310.1 - [+] show detail - phosphoenolpyruvate carboxylase 1
        Distance: 0; Region: exon11 (CDS)
      • AT1G53310.2 - [+] show detail - phosphoenolpyruvate carboxylase 1
        Distance: 0; Region: exon11 (CDS)
      • AT1G53310.3 - [+] show detail - phosphoenolpyruvate carboxylase 1
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 11-6899-1 - 5-prime edge 
    NCGGGANAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGAATT 
    TCCGCTATCT CCTTAGAAAT GTGTGGTCGC AGAGTCACAT GGTAACTCGG 
    ATCACGGATT CTCTTCAATG TGTAAGCT

AT1G53310.1

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxylase 1
Curator Summary
Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description
phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 6864 Blast hits to 6795 proteins in 1908 species: Archae - 27; Bacteria - 2661; Metazoa - 3; Fungi - 0; Plants - 1763; Viruses - 0; Other Eukaryotes - 2410 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53310.2

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxylase 1
Curator Summary
Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description
phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53310.3

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxylase 1
Curator Summary
Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description
phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR