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11-6932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 321255 [Map]; Strand: w
      • AT4G00752.1 - [+] show detail - UBX domain-containing protein
        Distance: -360; Region: promoter
    Flanking Genome Sequence: 11-6932-1 - 5-prime edge 
    CATAGAGGTG TATGGTTTAC ACATGAAACG CCGAAACACT CCTTCTCGGT 
    TTGGTTGGCA GCTCATGATC GACTTGCTAC CGGTGACCGT ATGCAAAAAT 
    GGAACAAAGA TGCAGTGGGA GATTGTTACT TCTGTACGAA CTGCCTGGAG 
    TCCAGAGATC ATCTCTTTTT TTCTTGCAGC TATACAGCTG GAATTTGGGA 
    AGCGCTTGCT CGAGGATTGC TTCAGCATCA CTACACAAGT GATTGGCACC 
    AACTGCTCAA CCTAGTCTCA GCCCATCGCA AGGATAAGGT AACTTGTTTC 
    TTGGTGAAAT ACATCTTCCA AACCTCCGTT TATACCATCT GGCATGAGAG 
    GAATCGAAGA CGTCATAATG AAGCTCCAAA ATCTGCTCTC ATTCTTATTC 
    AATGGATCGA CAAACAAATG CGCAACAGAA TCACCACCAT TCAACGCCAC 
    AAGGACCATC GATATGAGGC CACCTTCCAA CGATGGCTTC AAAGTCGAAG 
    TTAATCGCAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 321139 [Map]; Strand: w
      • AT4G00752.1 - [+] show detail - UBX domain-containing protein
        Distance: -244; Region: promoter
    Flanking Genome Sequence: 11-6932-1 - 3-prime edge 
    CCTCTATGCC AAGCCACTGT GTTCGANGTA GTGCGAATAT GATTCCAAGT 
    ATCTTTAGTA GAGAACTTTT CTTTGTTCGA GTTTTTTTTN TTNAANCNCC 
    NNCCNGGNTT NGNNAAAACC NTAANGGACC AAAANCNANC NNNACTTTTA 
    CCGGAACNCA AAANGTTTTN TNGNGGGGAN CAAAAANTTG AANNANCGNC 
    AAANCNANAT TANGGACTAN CGTAAATTNT TTTTNTTNAA TTNANCNNAA 
    AATNGANTTT AAANTNAAAN AGGGATANCC GNCNCCGTNG GGGGNACTTN 
    TTCCCGGGGG TNNNANNCAT TTNAACTAAT TTTAAAAGGG AAANCCCCGN 
    GGNTTCCANA NTTCCCGGGN AANNNTTNGT NGTTCAATTT NNCCGGGGGA 
    AANGGGGANN CCNACAANAA ACCCTNTCCA NTTTTNNNTN ACCNTNANNG 
    GNNCGNCCNA TTCNCNNNCN ATTNAAAAAC TGGNGGGNCT TNTTTTTTTT 
    AAANNNTNNN TTTNTANCCG GGCNCCCGAN NNGNCGGNAC GGGNNNTTTC 
    GTGNAAAGGC CTTTCGCCAA AATTGAGGGG NNNTANCCAA AAAAAAANAN 
    GGGTTNTTNT NNNNATNAAA NNGGNNGTNN CGNGGGAATN NTNTTNTAAA 
    ATGNNTTTNA TGGGGAANAN TTAGGGTTNA NTGANCCNAN TACNGNGAAA 
    TNNNAGATAN GCTTNNGNTT GNNCCCNNC

AT4G00752.1

Model type
Protein coding
Short Description
UBX domain-containing protein
Computational Description
UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G11740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR