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11-7003-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21600801 [Map]; Strand: c
      • AT3G58390.1 - [+] show detail - Eukaryotic release factor 1 (eRF1) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-7003-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    TCAAGAGCCA ATGAGTCCCA ATTTTCCTTT CTCAATAAAA AAGGTCGTTT
    AAGCTCAATC TCCAAAGTAT GGAATGCACC AATCCTTACA TGCTCGTTCT
    CCATGATATT CTTCCCGCGT ATGCGCATAA CATCGCCGTC TTTGTCATAG
    TCCACCTCCT CAACTTGTAC TTCTAGCTTA AGTTTAACAC GTTCAGTCCG
    GGTGAAAGAT CTTTTCTTTC CAAGGTCTTT GCTTTCTATT CGACTTAGCG
    ATGGAGTCGA GTCTCTTCCT TCACCACCAA CTTTTCTGAA AGTGATAGCC
    ATTACACTAT CCTCCGGGCC AATCAGGTTA TAAGTATACC AGAGATCATC
    CGAGTCCTCT GCAATCATCT TAACGCTTCC GGGTCCATTA CGAACAAAAT
    CCTTGCGAAT GATTTTCATC TTTCAGGATT TTTGAAGGTA TTTTCCACTA
    ACAGAATCTG AAGAATAAAC TGTCGATCGG AAATTGTGGT AGGGAATGAA
    GAACAATCAA TCGCTCTGAC AAGAAGAGAA GAAAAAATAA AAACTTAAAG
    TAAACTTTTG CTTAAATTAA GCTGTTATTG ATCTGAAGAA ATAGACTTGA
    TCTCCTGAGA TATACATATT TATAGCTAGC TATAAAGCT

AT3G58390.1

Model type
Protein coding
Short Description
Eukaryotic release factor 1 (eRF1) family protein
Computational Description
Eukaryotic release factor 1 (eRF1) family protein; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination, translation; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT4G27650.1); Has 768 Blast hits to 765 proteins in 318 species: Archae - 259; Bacteria - 0; Metazoa - 140; Fungi - 157; Plants - 51; Viruses - 1; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR