Home
Mutant Lines
12-0027-1

12-0027-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 23252663 [Map]; Strand: c
- AT1G62790.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)
- AT1G62790.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (CDS)

CNGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCC GAGAGATCAG TGGTGACGTT GCAACGACGG 
CTAAGACCGA GAGCTTTCTC AGTGGTGACG TTGAACTGAG CGAGCAAACC 
TGGACTGGTG TAGATTGTAC AGAGACATGT AAGTTCCTTC TCCACCGCTT 
CTTTAATCGA GTCGCAACAT TCTTTCACCG GCGTTGTTGT CGTGTTCAGG 
TCGTTGAAGC AAGGGACTAG CTTGCTCACG CACTCAGTTT GTGCTTCAAT 
CGCAGGAACT GAAAGCAAAG CCATCGCCGT CATCGTCGCC GCGAAGATCA 
TCATCGTCTT CGTCATTTTT TTTCTTTTCC TCTCTCTTTG CTTTTTTCTT 
TTGGGGTTAC TTGTGATTTT TGGTTTTGCT TTTGTTTTTG GCTATAAATA 
TTTATAAACT TGCTTAAGGA ACCTTTCGTA TTTTACTCTT TNCTTTTTTT 
TNTTCTTAAT ACTCCNTTNN TTNAATATGT NTCTTTTNTT TTAATGGNGA 
AAANAAACCG CTAAACGGNC GGNAACTTTC CGNCTAACAC TTNTAACAAT 
TNNTNGGAGA CCGTGTAAGG CCATAACTTT TAGGTNNNNA TCNAAACNNA 
TNTTNNATAA AACNATNNGG NNGNTNNTNN NNNNNNNGNT GGNANANNTT 
NTNNAAGGNN NNAAGNNNGG NGGGNNNC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 23252665 [Map]; Strand: c
  - AT1G62790.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 0; Region: exon1 (CDS)
  - AT1G62790.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-0027-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
TCCGCTTGTA CCGGTAACCA ATTTCATTTT CTCCGATCTC CGATTTTTTT 
ATTTTTTGTC AACAACATGC ATTATGAATG GATTTGTGGA TTCTGATTAA 
TGTGAATGTG ACTAAGAAAA TTAGCATAGT TTTTTGTCTA CCTGCTAACA 
TTTTTTAGAT CTTGTTGAGA TTATGAAACA GAGATTTGCA ATTTCATATA 
TCAGTATTAA TCATGTTTTT GTTTTTTCTT TAGCTAAAGG AGCTCCATCG 
CCAAAAGCT
```

AT1G62790.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 319 Blast hits to 315 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 319; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G62790.2

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 314 Blast hits to 310 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR