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Mutant Lines
12-0049-1

12-0049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 158229 [Map]; Strand: c
  - AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
    Distance: -47; Region: promoter
  - AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
    Distance: -47; Region: promoter
  - AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
    Distance: -47; Region: promoter
  - AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
    Distance: -47; Region: promoter
Flanking Genome Sequence: 12-0049-1 - 3-prime edge
```
CCAAACATTA TCTCTTCTTC TAATTATTTA ACCTTTGTTT AAATTTTCCC 
TCAATACTTA ATTAATCTTT GACTCGGCAC TAATCAGCAC AACAGAGTAA 
ATTTGACCAT ATAGATTTAG ACACGTGTGC ATTTCATGAT AAGAGATACT 
CAAGCT
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 158113 [Map]; Strand: c
- AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
  Distance: 0; Region: exon1 (5UTR)

ATGTTTGGAG CCTTGGTTGG TTCTTACTTG TTACTTTGCT TCGTACGGAT 
TTGAAGGCTT TACCTCACCG GAGCTTCCAA GTAGAAGACG ACACTGAGTC 
ACTGACACAG GGATACAAAT TATGGCGCCT TTTGGCGGGA AATCTTTAGC 
GGACGTTGTT TCTGGCATCG GAGGGAATGG TGTTGGCGGG GCTCTGGCTG 
CGGTGGCCGC CGCTCTGTTG GTCCGCCTCT TCGCTGGACC TGGCATCGCT 
CTCTTACCTG AAGACGAAGC TGAAGATGAT TACGCTGAGA CGGAAGACGG 
TGGTGGTGAT TCAATTCGTC CGGTGACAAT CCGTTGGAGG AACATCACCT 
GCTCGCTCTC CGATAAGTCC TCCAAATCGG TGAGCACATT TCTTCTCCTT 
TTGCATGTTT CGATTGCGCG TATATTAGTC TTTCCAATTT CACGTTAATA 
GCCGAATCAA AATTGGTTGA TTATGTGATT CTCANGTGAG GTTTTTGTTG 
AAAAATGTAT CCGGAGAANC AAAACCTGGG ANGNTGCTAN CGATTATGGG 
TCCTTCTGGT TCTGGGAAAC AACATTGCTC AATGTTTTAN CANGACANNT 
TANNTTATNT CCNCNTTNGN NTTTNNNANG NCNNTTNGNG GGNNNNGGNN 
AANCNNNCTN TNNNAA

AT2G01320.1

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.2

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.3

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.4

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR