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12-0187-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23285689 [Map]; Strand: w
      • AT1G62870.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0187-1 - 5-prime edge 
    TCCATCAGAA GCAATCTGAA AGAACATTGC GTCGTGGATT CTCGATTCAG 
    CCTCTGCTCT CGAATCTTCA TACTTCAAAT CCAATCTTCC GGTGACAAAA 
    TCTCTCCTTG AGATGATCGG TAAACCAACT TGCGTCAAAA AAGCTCTCAA 
    CTTTGGATGC TCGAGACCAG ATAAAGAAAC AGAGCCACAA GATTCAAAAA 
    CCCAATCAGA GAGAGAATCT AACGCAGAAT CTATCTGAGC TTTAGTTAGA 
    TTCCGCGTCT GAGAAGTTTT AGGACTCTTG AGCTTCTTCA CACTATCTTC 
    AAGCATAGCT AATGGACCCA AATCGTCTTT TCCACCGGAA AGCATCAAAT 
    GCGGCTGCTG TGTAACCGGA AACTGCCCAC AGAATCTCGA GGGATCAACG 
    ACACTAAGAG GCGTCACATT ATAAGACCCT TGATGATGAT GATGAGGGTG 
    ATGATGATGA TGATTCANAG CCTTCCACGG CGGAGGAATT ACGTTTCCGG 
    NGAGAANAAA ACGGAGGAGG AGGAGGAAAA GGAAAAATGG GGGANATGGG 
    TTAAGGNAAG AGTTGAAATT GGACAAGTTC CCCCTTTAAA ANGGCNCAAA 
    ANCGNTNGGG GAAGGTTAAA AANCTGNAAA AACGGGGGTC CCATTAAANA 
    ACATTGGGNN TTAACCGGTT TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23285573 [Map]; Strand: w
      • AT1G62870.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0187-1 - 3-prime edge 
    CTGATGGATG GAAATTCGAC AGCTCCGGCG AGAATTTGGT GAATTTGATT 
    GTGAATTTGC CTAATGGGAC GAGTTTGTAT AGACGAGCTG TGTTTGTGAA 
    CGGAGCTGTG CCGTCTAATT ACGCAGAGGA GGTTTTGTTG GAGACGGTGA 
    GGGGTATTTG TGGTAATTCA CCTCAGAGGT GTGTTGGGAT TGTTTCAGAT 
    AGGTTTATGA GTAAGGCATT GAGGAATCTT GAGAGCCAGC ATCAATGGAT 
    GGTGAATCTC TCTTGTCAGT TTCAAGGTTT CAACAGTTTG ATTCGAGATT 
    TTGTAAAAGA GCTTCCTTTG TTTAAATCCG TCTCTCAAAG CTGCTCGAGG 
    CTTGTTAATT TCGTGAACAG CACGGCACAG ATACGAAACG CGGTTTGTAA 
    GTATCAGTTG CAAGAGCAAG GAGAGACTAG GATGCTGCAT TTGCCTTTGG 
    ACAGTTCTTT GTTTGAGCCG TTGTATAATC TCCTTGAGGA TGTGCTTANT 
    TTCNCTAGAG CGATTCANCT GGTGATGCAT GATGATGTGT GTAAGGCTGT 
    TCTAATGGAG GATCATATNG CTNNANANGT TGNTGAAATN GTTNNANANT 
    TNNNNTNNTN NAACNAGGTN NAANGNNGNN NAT

AT1G62870.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12380.1); Has 351 Blast hits to 343 proteins in 42 species: Archae - 2; Bacteria - 0; Metazoa - 27; Fungi - 5; Plants - 299; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR