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12-0362-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27089587 [Map]; Strand: c
      • AT1G71960.1 - [+] show detail - ATP-binding casette family G25
        Distance: -1339; Region: intergenic
      • AT1G71970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -3441; Region: intergenic
    Flanking Genome Sequence: 12-0362-1 - 3-prime edge 
    TATAGATACA TATATAAAAC ATATACAGTT CATTGTGCTG GGTTTTTTTC 
    TGAGGCAATT TTTCATACAT AATGTCTTTC TTTCTATTAG AAGTTTCAAA 
    TCGACTATTC TACTTTTTCT GGCACCGGCG ATGTCTGTTT GTATTTATTG 
    GGCTATATGA TACCATGTAT TTCTGTAAAT CATTCGAAAC CGTCCAAAGC 
    TGCATAAGCT

AT1G71960.1

Model type
Protein coding
Short Description
ATP-binding casette family G25
Curator Summary
Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.
Computational Description
ATP-binding casette family G25 (ABCG25); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1); Has 400795 Blast hits to 363827 proteins in 4147 species: Archae - 6947; Bacteria - 316897; Metazoa - 8938; Fungi - 6866; Plants - 5594; Viruses - 13; Other Eukaryotes - 55540 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G71970.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR