1. Home
  2. Mutant Lines
  3. 12-0426-1

12-0426-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 214971 [Map]; Strand: c
      • AT4G00467.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 12-0426-1 - 3-prime edge 
    CTTCTTGCCC ATGCAGCTAT GAACCTAAAA TGTTTGCACA AACTTAGAAA 
    TCAAATAAAT GTCATCGCTT TCCTTGACAG ACCCGAACCA TAGAAAATGA 
    TTGGAAACAA AATTTAATAG AGTTTTGATG CTAACCCTTT AATCATTTTA 
    GTTCTCTTTT AGTTGATATT GTTTTGTTTT CCGAAAGCAA TAGAGCAGAA 
    ACCTTAGTAA TGGGAGTTTC ATCAGATTCT GAATTGGAGA AATCATTAGT 
    TCTTCACTGT TTTTGGCCTC CATCTTCAGC TCCCATGCTT TCCTCTGCAA 
    TTTATCCTAC AAAAATAAAT AAATTTTCTT GAGAAATTTT GAGATTATAT 
    GTTATTGTCG ATGTTCTTGA ATATTTCAAT GTGCTCAAAC ACCAAAAAGT 
    ACTAGTAAAA AGATGAACCT AAGATTAATA AGTCTCCACA AAGCT

AT4G00467.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR