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12-0491-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12163897 [Map]; Strand: c
      • AT4G23250.1 - [+] show detail - kinases;protein kinases
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 12-0491-1 - 5-prime edge 
    CTCACTAGCA NTATCCNGAA TTTACACGTT CCTCAACCAT CAAGAACAGA 
    TGGCCTCGAG TCATAGCCAA ATCTAAGGTC AGGTCCAAAG CCTTTGGAGT 
    ACTTGTGTCG TGTGTGAGTT ACNTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12164013 [Map]; Strand: c
      • AT4G23250.1 - [+] show detail - kinases;protein kinases
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 12-0491-1 - 3-prime edge 
    CTAGTGAGCA TAAGATTGTT TGACGACAAG TGGGGACTAT CTGTAAAAGT 
    GAACAAGGGT TCTCAAAACC CTTACAATCA TTATCAAACC CTAAATTTCC 
    CTGATTATGA ATGAAAGACT CTTTAATTTG GAAGATGAAT CATAACCACA 
    TGGAACAACA AAACTCACAT TGAATATCAA TTTCTCGGTA CGATTTTCTC 
    CTCCGCTAAA AAGAAAACGC AGAGAAAGAA GCAGCAAGAC GATGACGATG 
    GTCGTAACCA TAATTCCCAC TGAAAGTGAA TCGTCATCTA CACGCAGTCA 
    CCAAGTGAAA ATTTCTAAAT TTGTGTTTTA GCCCTTTAAA TTTTATAATA 
    TTGTTTATTT TTCTCCTAAT TTAACCCCCT TAAACTTACA AATTTATGTT 
    CAAACCCTTT ATTTTTTTTA TTGTGACCCC TATAAAACTT ATTTCTATAT 
    GGAAACATCA AAAAACAAAA ACAGAACATG CTAGATATTT CAACGAGGAT 
    TAACTTGGGT GATTGTTGCT TCATCTACAG AACTAGTAAA AGACTTGCTG 
    CTCGATTGAC CAGGCACCAT TCCCTGGCTT GATGGGTTCG ATCCTGGTCC 
    GTTCCTGAAN AAAAATCCAG GTGGCTGAGG CACAGGTAGA GTAATTGAGC 
    TGGTTGTGAG CACTTGGTGA ATCGTAAACA TTGTTGGTCG ATCTGCAGGA 
    TTTTCTTGAA CACATAACA

AT4G23250.1

Model type
Protein coding
Short Description
kinases;protein kinases
Computational Description
EMBRYO DEFECTIVE 1290 (EMB1290); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (TAIR:AT4G23260.1); Has 121653 Blast hits to 119053 proteins in 4422 species: Archae - 98; Bacteria - 13672; Metazoa - 43987; Fungi - 10320; Plants - 35330; Viruses - 426; Other Eukaryotes - 17820 (source: NCBI BLink).
Link
InterPro Scan - TAIR