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12-0505-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1083006 [Map]; Strand: w
      • AT1G04150.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0505-1 - 5-prime edge 
    NCTAANATAC CATAGCGNGG AGAGACAAGT AAACCTTTGA TTTGATCGAT 
    GAGAGTTCCT CGATGTGAAC ATTTCCAGCC TTTGAATGCC ACGCCTCCGC 
    AAAAGCCTCA TCAGCTTGAG TCCCGAACCA CACCGAAACC ATAAGCTCTC 
    CATTACCTCT ACCGGGGGGG GTATTCTCTA TCTTGNACCA TNGGGGGGCT 
    AANNGACTAT TCNGAGGAAC GNCGGGGNGG GATCTTCCTT AAATCAAANA 
    AAANTCTACC CNCNAAACNN ANNNNATTAN CNTNTTTAAN NAANANNTCN 
    CCNNNCNGNG GNGGNNNANA AAAANGGGGG GGGNGGNNNN CCCCCCCCCC 
    CNNNNCNGGN CCNGGGGGGG GGGGGGTNTA NCNCGNGGAA NNCNCNCNGC 
    CCCCTNAAGG GGNGNNNGGG NNTANGCCGG NNNCCCCCNG NCCCCCTNAG 
    GNGNGGNNNN NGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1082891 [Map]; Strand: w
      • AT1G04150.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0505-1 - 3-prime edge 
    ATCTTAGGAT ATCAGTGATT GAGGCTCAAG ATGTTGCAAT TATGGACAAG 
    GGATCAAGTC TCATGAGGTT TCCAGAGCTT TCGGCGAAGC T

AT1G04150.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 3504 Blast hits to 2915 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 2158; Fungi - 82; Plants - 979; Viruses - 2; Other Eukaryotes - 281 (source: NCBI BLink).
Link
InterPro Scan - TAIR