1. Home
  2. Mutant Lines
  3. 12-0520-1

12-0520-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16650474 [Map]; Strand: w
      • AT2G39880.1 - [+] show detail - myb domain protein 25
        Distance: -995; Region: promoter
    Flanking Genome Sequence: 12-0520-1 - 3-prime edge 
    AGCATATATG TGTATATATG TTGAGTAGGT GATCAATAGG TGCTTGTAGA 
    CGCAGACATG CATATTGCAT GCAAATGGTG GGGTAAAATG GGCATGCGTG 
    GTCTGTCGAT ATATATATAT ATGTATATAT GAAATTGATA TAGATATATA 
    TATATAANAA TCAAAAATAA AAGTGAGTCA TTTGGAAATA AGNGAGNGCA 
    NATNACATAT ATGAAAATGT CGGCTCTTCG TNNGACAAAN ACTCCAGTCC 
    CACTGNGGTG NACTCTTGTC GCTCACTACC TCTCTTCCCT TCTCTAGAAC 
    GGTATAATAT CGNNACATAT GCNACATCAT ATTCATATCT ATATTATATA 
    CGATCATNAC ACTTTANCAT ATATATTANC TGGTTAGAGA AGANGCTCGT 
    NNAACCCGGT GTCGGTNACT TTACTAGTCN ATTTTGGAGA AGCT

AT2G39880.1

Model type
Protein coding
Short Description
myb domain protein 25
Curator Summary
Encodes a putative transcription factor (MYB25).
Computational Description
myb domain protein 25 (MYB25); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1); Has 8881 Blast hits to 7992 proteins in 491 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 531; Plants - 5628; Viruses - 6; Other Eukaryotes - 1882 (source: NCBI BLink).
Link
InterPro Scan - TAIR