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12-0555-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 325038 [Map]; Strand: c
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0555-1 - 5-prime edge
    GCTCACCGAG NTCCGCGGGG ACCGCATTCT AAGTCTCACC CCCGCCGGAG 
    AATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 325154 [Map]; Strand: c
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0555-1 - 3-prime edge
    CGGTGAGCAG CAGCGCTNGA AGAAGCGGGT CAACCGCTCG GCGGAGCAGG 
    GCGGTGGTGA AGGCGTCGGT GGATC

AT5G01840.1

Model type
Protein coding
Short Description
ovate family protein 1
Curator Summary
Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.
Computational Description
ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR