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12-0611-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7056959 [Map]; Strand: w
      • AT4G11690.1 - [+] show detail - Pentatricopeptide repeat (PPR-like) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0611-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    GTAAGTACGC TCATTAGCCA CTAATCCAAG TTTCCCCATC TCAAAAAACA
    AATCTTTAGC CTTCTCAATC TCACCTTTCT TGCAACACCC ATCAATCAAA
    GTAGTGTAGA TAACTACATT TGGAGAAAAC CCAAACTCTG TCAATTCAAT
    AAGAAGATCA AAGCT

AT4G11690.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR-like) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 58414 Blast hits to 14966 proteins in 309 species: Archae - 5; Bacteria - 45; Metazoa - 1145; Fungi - 1103; Plants - 53991; Viruses - 0; Other Eukaryotes - 2125 (source: NCBI BLink).
Link
InterPro Scan - TAIR