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12-0813-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23384370 [Map]; Strand: w
    Flanking Genome Sequence: 12-0813-1 - 5-prime edge 
    GTGACGTAAG GGAAAGCACG CCAAGGCAGC AGCATGTGTG AATGTACGCA 
    AAGGTCGCAG CTTTGTGTTT CAAAACCGAA GCAGAAGGGA CCAAATTAAG 
    AGACTGACTT GATCATCATA CACAGTCGTT TCATTCCTTT ATTCTCATCT 
    TTCTCTTCCT CCCATTTTCT CACACCAAAT TTCAGCACCT AATCCGTTAG 
    TTTAACCATG ATCCACAACA ATAAACCAAG TTGTTTGATT GGTTTAAACA 
    AGACACTCTA AACGCAAATT CAACCTTCTT TTCCTTTCTT TTTTGGTCAA 
    TTGAAACATA AATGTCTGAT AACCTATGAC TGACTAGTCA AGCTATCCTA 
    ATGTTTCTGA TTAAATTAAG AAAAGGCAAA TACAAGGATG ACTTGATTCC 
    CTCCTTTTTC TCAAGACTCG TTGATACATA CATCTAAAGT AATATTTATG 
    TGTAATAAAC AATGGGATTG GCAAAGATGC GGCCTTATTA TTGAAAAGCG 
    ACGTCTTTTT TTTTTNTAGA AGTAATCCAT TATTTTNTNC ANCNNCTNTN 
    TTTTNNGCCA AGAGTAGNNC TACTNANCTC CTACNTCTNA TNNAAATNTA 
    ATANNNTTTT TCTTTAAANA AAAANAAAAG GGGAAATACC TAAACCGNAC 
    TTTGNCTNTT TATANTACCC NCCCCCTAAA NTTTCNNNNC NANCCTCTGN 
    ANCNANCNAA GGTNATTAGA AGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23384254 [Map]; Strand: w
    Flanking Genome Sequence: 12-0813-1 - 3-prime edge 
    TACGTCACCT TCTTCTCTCT GTCTCTTTTC CACTTCAATG ACACAAAACT 
    TGGCAATTAG TTTATTCATC CATCCAAGGT TTTCTTCAGG CTACACAATC 
    AAAACTTCTG ATCTTCTTTC ATCTTTGTAC AAATTAACAT GATTGTTGAT 
    CTATATTCTT TGGTACTAGA GCATTTTGAT ATATATAAAA ACGCATATAT 
    AAGATATTTC AAAATCTCAT CATGTGTATC TATATTAAAT TTATTTGCAC 
    TTTGGAAACT ATAGGTGGGT GACCACTGAA TAAAGATACA TCCTTTATTC 
    CCTTTTGATC TGTCTAATTT TTAGGGATAC CCACATTTTC CATTCTTTAT 
    AACCAATCCC TTAGAAAAAT ACTAGTCATT TTGTCTCTCT GATTATTCCT 
    TTGCCTTGCA ATCATTGTTC TTGTTTGGAC GTTTTGTATT TTATACTACC 
    AATTAAAAAT TGAATGTATC TGCCACTTTG AATGATGAAC CCTCTNTTCC 
    ATTNTATNGG NNGCTTTAAA CNACCTTTNA NTTNTTAGGG ACCANCCNNC 
    TTTTGCTNTT GATNNGGNNA CAANANACAC CNACNTCCNN CNCCNNANNC 
    NNNNNTNTTT TNNANNANNG GGTNGAAANN AAAGGGNCTT TNNTGCNNAA 
    ANANCCCTTT NGNNAAANNA NNNNNCTTNN NNNGNNNNAA NNGGAANNNN 
    NTTTTNNANN ACANNCCNGG NGGNNNNANN CNNNNNNNNC

AT3G63300.1

Model type
Protein coding
Short Description
FORKED 1
Curator Summary
Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway.
Computational Description
FORKED 1 (FKD1); CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 742 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 118; Metazoa - 127; Fungi - 51; Plants - 226; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63300.2

Model type
Protein coding
Short Description
FORKED 1
Curator Summary
Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway.
Computational Description
FORKED 1 (FKD1); CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR