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Mutant Lines
12-0852-1

12-0852-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 20694008 [Map]; Strand: c
  - AT1G55420.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
    Distance: -56; Region: promoter
Flanking Genome Sequence: 12-0852-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA AAAACCTAAT AATTTTACTC TCTCATTTGC 
TAAATCTTTC ATTCCAAAGA AACCCATATG GAACCACCAC CTCCTCATTT 
TTCTAGAGCT AAACCTCCAT GTCGTCTGTC CGATCCGGCT CAGCCCCACA 
AGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 20694020 [Map]; Strand: c
- AT1G55420.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: -68; Region: promoter

AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCA 
TAATAAATCG TTCTGCTCCA AAATATGTCC TATTATTATA AGATCTGCCC 
AGAGAGTTAA AAGACCAATT CCAATATAAA GTCAACCACT CAAGTTTCTT 
GTTATCTCTC TCTTAATCCA GCTGTAGTGA AGACAAAACT AGTTTAGGCN 
TTCCAACTAA ACTAAACACG ATTATATTAA AATCTTGCGT AATGGAAGGA 
ACTTTAGAAA TTAGGAATGA TTCATTATTA TTAAATTTTG TTAAGTAAGA 
ATAATTACAA GCAAGCACAT TATTTACATG AAATCGACAA GTCTGTATCT 
GCTTGCTTGT AAATAATTAA TGCATGTGGT TCCCTATTGT CAACGGGATT 
AGTTGAGTCT CTTTTGTGGG AGAGAATCGA AAATCTTCGG ACATAAATGT 
AACTATTTTT ACAAGCATTT GTAAAGCCTA CTAATCTAAG TCAACTAGCG 
GTTAATAAGA CTAATTCTCC TTTGCCGACA GAAAAAAAAT CTCTTTTAAA 
ATTTTTTCTT CTTACTTTTT TTGTTTTTTC CTTTTCTCAA AGAAAAAATG 
TAGTTTTAGC TGCGCAGTTA ANAACATTTT GATTTTTAGT AAAACAAAGA 
CGAAAAACCA CNCCTCAAAA AGAAAANAGA ATATTNGATG AANTAAAAAC 
CAAAGCTGTT CTAAAAACAT TACCCTAAGC GTCCGGGAAA NAACNGNTTG 
CGGTTAANCG NTTTTTANCT NTTTNTGAGG NGATTTNCCG N

AT1G55420.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: embryo sac development arrest 11 (EDA11); FUNCTIONS IN: zinc ion binding; INVOLVED IN: megagametogenesis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55380.1); Has 31248 Blast hits to 2717 proteins in 273 species: Archae - 49; Bacteria - 26496; Metazoa - 873; Fungi - 230; Plants - 1563; Viruses - 57; Other Eukaryotes - 1980 (source: NCBI BLink).
Link: InterPro Scan - TAIR