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Mutant Lines
12-0895-1

12-0895-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 68158 [Map]; Strand: w
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 2679; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 1115; Region: intergenic

TATATGTGTG TGTTAACTTC GTGAGGGTGA AGTAAGTAAA GTGGTGAAAA 
CATGTTCTTT TCTCTCGTCT CAAGGCACCC TTCATCACAA GCAACACACC 
CAACCCTACT CAATCGGATA GTTAGGAGAA AATTTACATT ATTATACAAC 
CTTTATAAAA TGAAGAAGAT TTCAGCTAAT TTGTTCTCCT AAATCGGGGT 
TTGTATGATG AACAGAATCG TGCTTTGCCA TAATTAGAGG AAGAAACAAA 
AAAGTCAGCT AAATATATTA ATCTTGTCAA ACAATAATTT ATATTGAAGG 
ATGACGTGTT AGAGTTTGTA TGCATGTAAC CATATATAAA TGATTGCGTC 
GTTCATTTTG TATTAGATTT TAGGATAATG ATTAGTTAGA TTAGACAAAA 
ATTGATCAAT TATTATTAGG AGATCACATG GGACTGATAA GGATAAAGAA 
AAACAGAGAA GATTTCTTCA TCTCATTAGA GCCAAAGTAA TAATAATTAT 
GATTAAAAAA ACCAACCAAN ATCGGCGGGA AGTAATTAAC AANTTACCAC 
AATATAAAGT TGGTAAAAGG AATTTCTTAT TTTCTTAAAT CATATACATT 
TCTTTAAACA TAATCTAACC NCTCATTTGA TCATTGAAAC ACANTATTTT 
NATANTTTNG CTCCGGGCAC CNGGATGANA ATTACCANCC CGGGNCGNNG 
ACNANCGGCN CCNTTNANNN NNNNNCNNNC CCCNNNCNCN NNGNNNNGGN 
NTN

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 68042 [Map]; Strand: w
  - AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
    Distance: 2563; Region: intergenic
  - AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 1231; Region: intergenic
Flanking Genome Sequence: 12-0895-1 - 3-prime edge
```
CACATATATA TTATTCCAAC ATACCTAATA TTATATTAAT ATATCATGAA 
ACTTGAAAAT GTGTTGGTGT ATTTGTATGT CATCCATTTT TTTTTTTTNN 
AANTTAANGG NAAAAATTNN TAAAAAAACC NTTTTNCCAA ANNNGCCCAA 
CCTTTTAAAA NNNGCCAAAA AAAAAANNTN NNNTNNTTTN TGGGNTGGNA 
ACCCNACCNG GGNGCCCCCC CCNNNCCTTA ANGGCCCCCC CCTTTTGNAN 
GGGNCAANCN ANNNTCCCAC CCGGGNCCGG NACCCCCCGG GGCCCNTNNA 
A
```

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR