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12-0978-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1663468 [Map]; Strand: w
      • AT1G05577.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-0978-1 - 5-prime edge 
    CGAATAGCTC TTATTCTTGA TATAACTCGA AGACGACGTC GTAGACGATA 
    CACTTGGTCG ACCCGACTCC ACATCGTTAC CCGACCCGTT CTCCGTCGAA 
    CCGTCTCTCT GGCCGGAGAC TGTTTTCGGA TCTTGTTTCT TAAGAACGAA 
    ACCTTCTTCG TTCGTGGTGG ATTCCTCCGT GACTGTCGAC GTTGTTGCCG 
    TCGATCTCTG TGAGCAGAAG ACCGGAGACT CTTTTTGGAT CTTCTCTGAC 
    GTTAGTTTCA ACTTCTGGAG TTTTTCTTCA GCGTCTATTC CACCGTTTCT 
    TGTCACCCAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1663404 [Map]; Strand: w
      • AT1G05577.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-0978-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TNGCTATNCN AGCGNACGNG CCTCTCACGT GTTACNGAAC TTGATGAAGT 
    GTGGTGGTTT GGACACAAAC GACGCCGTAT TGGTGCCTTT GAATAAGTCT 
    AGGTCTGGGG CTTTTGGTCC GGCTTGGGAA GATGAACGCA GATACCAATA 
    CCACCAACAG CACAATGCTC GGTACGCTCC AAAGTAGCCA TTACTCATAT 
    TTTTATTCAA TTAATCAAAT ATTAAAATTA GTTACTTTAT CACTGTTAAT 
    GCTATATATG ATTGGGACTA ATCTTATGCT ATATCATATA ATATTAATAT 
    TATTATCTTT ATACGACTAT ACCTTATANT ACTTGAATGA CCAGA

AT1G05577.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF966)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR