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Mutant Lines
12-1171-1

12-1171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity /structure development stage	Phenotype
stem (PO:0009047)	present in greater numbers in organism (PATO:0000470) (Branching::bushy)
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997) (Seed yield::sterile)
whole plant flowering stage (PO:0007016)	late (PATO:0000693) (Flowering & Growth::late flowering)
petal (PO:0009032)	abnormal (PATO:0000460) (Flowers::petal)

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 20645449 [Map]; Strand: c
- AT1G55325.2 - [+] show detail - RNA polymerase II transcription mediators
  Distance: 0; Region: exon21 (CDS)
- AT1G55325.1 - [+] show detail - RNA polymerase II transcription mediators
  Distance: 0; Region: intron21 (CDS)

CCTGCTGCAG AACTTGAACG AAAAGACACT GCAGCCCTTT TGTATCCTGT 
CTACTGCTAA TTCCACCAAA GGGAAATATA TGTGTGTCAA GCAACTCACC 
CCTGGCATCC GTCCAGATGC TTTACAAGCC ATCTCCAGTC CTCTGTCCAA 
CCGTAGCAGC AATGTAAACT TGGAATAGCC TTTCCTTCAA GCTGGGATAC 
ATCCCCCTGG GAGCTTGATC CCGATGTTAT ACCTTCCATT GAATTCATGC 
CAGGTCCAGA ACCTCTGCCA CCATCCTCGG GTATTGGCTT GGAAGACTCA 
GAACCCAAGC TGGTGAAAGT AGGTGAAACT CCACGCTCCA CAGAACCAGG 
CTCGGAAAGA ATGAAAAGTG GTTCAAATAA ATAGAAAATT TCATCATTAA 
GGTAAAAATC TCCATTTCTG TTTGAGTCGC AGCTTAATCC TCCAGATN

AT1G55325.1

Model type: Protein coding
Short Description: RNA polymerase II transcription mediators
Curator Summary: Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.
Computational Description: GRAND CENTRAL (GCT); INVOLVED IN: regulation of development, heterochronic, regulation of radial pattern formation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G55325.2

Model type: Protein coding
Short Description: RNA polymerase II transcription mediators
Curator Summary: Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.
Computational Description: GRAND CENTRAL (GCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med13 (InterPro:IPR009401).
Link: InterPro Scan - TAIR