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12-1173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 478476 [Map]; Strand: c
      • AT2G02020.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -625; Region: promoter
      • AT2G02020.2 - [+] show detail - Major facilitator superfamily protein
        Distance: -625; Region: promoter
    Flanking Genome Sequence: 12-1173-1 - 5-prime edge 
    CAAAAAATGC TCATTGGAAC AGTGTTACCA CTATCAACCA GATCGTTGGA 
    TTACTCTTGT CTCTCTCGAA GTCGAGAAGT TGGTGGCGGT GACCACTGGA 
    CCATAAAATG TGTTCTTGTT AACAACACNG TTTTAAGAAA TTGCAAAATT 
    GAGTGGACCT ATTGGGCTTT AAATATTAGT GGGTTTCCTA ATTTGTACTT 
    GTTGGGCCAA TTTTATGACC TCCATTGGAT ATAAAATATT TGGTAAGGAA 
    TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 478592 [Map]; Strand: c
      • AT2G02020.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -509; Region: promoter
      • AT2G02020.2 - [+] show detail - Major facilitator superfamily protein
        Distance: -509; Region: promoter
    Flanking Genome Sequence: 12-1173-1 - 3-prime edge 
    ATTTTTTGGC ATATCCCTCA ATATATCTTT ATTGGGAACA TCTAGCGTTT 
    TGTTCTTTCT TAGTCGGCTT GATTTTTTCT ATGAACAATC TCTAGATGCA 
    AAATTTGTGT AGTGCTTGGA CTCTTCACTC GGCTCGTTGA TTCTTACACN 
    TTGTTGCATA TTTCACGACA ATGAACCTTA GTAACGGTCA TCTTGATTAC 
    TATTTTTGGC TTTTGGTCTG TCTTGGCTCT GTTAATTTAC CGGTTTGGCA 
    AGAAAGGTTT CGTAAGATAT GTTTGATGTC TTCTTTAAAA CTTGAAGTCT 
    CTAACTTGTT TGATAACTTT TGTTGTGTTA GGGGAAAAGT GTGCTATGGC 
    TCAAAATTTG TCTAATGCTT AAGTCTAATC AGATTAATAA AGTTTGTGTA 
    TTTGGTTTTA TATTCCCTCT TTTTAAAAGA ATTTTTTCTT AANAATGTGG 
    TTCTGTGGTG AGTGACCACT CACACCACCA ACAACAACTT GGTCAGTGGG 
    AGGATCATTT TATTTGATCC TTANAAGCT

AT2G02020.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8051 Blast hits to 7680 proteins in 1472 species: Archae - 0; Bacteria - 4049; Metazoa - 790; Fungi - 469; Plants - 2161; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02020.2

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1).
Link
InterPro Scan - TAIR