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12-1230-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 761085 [Map]; Strand: c
      • AT4G01760.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1230-1 - 3-prime edge 
    GATAGCTTCC AAACGCTCAC AACAATCACC TCTCCTCAAA TCATTACAAG 
    GCATCATAAG ATGCTCGTGG ATCAACGGTA CTGACACTCC ATCAGAGTCC 
    ATGGTCGTAT AACTTGAGAT TGGGAAGAAA AAAGAAGAAA AGTTGGATCN 
    CGAAATCTCN AAGCTCCTTT TCAAGTCTCT TTCTCTCTCT CTTTTAAAAA 
    AGTCCTTGTT AATCTAAAAA ATGCTCCACT TAGAAGTCCT TGTTAATCTC 
    GAAGATGGTC TCACAAAAAT CTTATAATAT GTTTTATATG TACGTGATGA 
    CAGAAGATTT TTTTTTAAAA TAATATAACT AGATTAGACT CGCGGACACC 
    GCGGAACTTT CCATCCATAT ATGGATATTA AGACCAAGTC CATCGATAGT 
    TTTTAGTGGG TTTTTTAGTT GGTTTCTAAG ANAATAGNGG GTCTAAATTA 
    AATAAAAATT CAACAATAAT TTTAGGAACG TTCCTAAAAT TAGGTTTTTG 
    GAAACTCATT ANAAACGCAT ACGTGGCTAA TNGNGATAAA TTGNTGGGTT 
    TAAACAAAAG GAAAATTTTC TCAGCTTTCT CTTTTGGNNG GNTTNTCCGN 
    CGACGATNCC AAAGGCGATT CANCTTGATT TGTTTGATCC ANCNNTTTNA 
    TCCTNAAATN GGGGNNAGCA NNCNNNTNTT NTNNNTNTAN NNCCNGNNG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 761020 [Map]; Strand: c
      • AT4G01760.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1230-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTG CTATTGCACA ACCTGCGATT TCTTCGTCCA 
    CAAGAAATGT GGTGACGAGG CCTCTGAATG CATTGAAAAC CCATTTCATT 
    CCAATCACCC TCTTCGGCTT GGTTTTCTTT CTCGTCTTCA GCGCCAACAT 
    TGGCTTAAAG TAGTTCGCAG TTGTGATTTA TGTGGAAAGA ACATCGGGGA 
    TCTATTCTAT CGTTGTGAGA TCTGTGACTT CGACATGGAT TTACACTGTG 
    CCAAGTATCC ACCACTAGAG GTTATTGACA TTCCCGAGAT GCATAGCCAC 
    AAGCTCAACC TTCTCAAAGA TCGGGTCGAG TTTGATTGTG ATGCTAAATG 
    TGGGAAGATT GGTTATGGGT TTCCTTACGA ATGTCATGAA TGTGATTCAA 
    AGTTCCATGT GGATTGCGTA AGGTACTCCT CATCGGAGGA AGTAAAACAT 
    CCTTTAGAGG TAAACCACTC TTACCACTCC TTGCACCCTC TTAAGCTCCT 
    CATGGGTCAA CCACCANACT ACTCTGATGG AAAATGTCGT CTTTGCGGAA 
    GAAAGATTGA TGATAAATTG TTTTATCACT GCTCTTCTTG TAACTTTACC 
    TTGGATATGC GTTGTGTTTT AAATCCACCA CCCAAAATCT GTTTTGGATT 
    TGAAAACTCA TGATNNTAAC TTAATTNTTN TCCAAAGGCT ATTTTTTTAN 
    A

AT4G01760.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 1878 Blast hits to 651 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 1845; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR