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Mutant Lines
12-1337-1

12-1337-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 19125687 [Map]; Strand: c
- AT3G51560.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon1 (CDS)
- AT3G51570.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -671; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAT CAGGAGCTGG TCAAGGTTTC CGAACGCCGG 
CGGAAAAACT GTCTCGCGGT GGTTCCGGTG TTTTACCCAG TCACGAAATC 
GTTTATGAAG AAACAAATCT GGAATTTGGG CGATGTTAGA AGCGATTGGC 
CAAGTGCTCT ATTGGAAACT GTAGACTTAC CAGGCCACGA GTTATACGAT 
ACGCAAAGGT TTGAACTTTG AAGCATTTTT AAATCATTAA CTTCACTAGA 
CCTAGACCAC TTTGGAATAT TTACTCATTC TCTACAAAAA TATGCAGTGA 
CTCTGACTTT GTGGAGGAGA TTGTGGCTGA TGTGCGTGAA AAGATCAACA 
TGTCAGACAA TATTGGAATC TACTCAAAGT TGGGGAAGAT AGAAACATTG 
ATTTACAAGC AACCGTGGGG TGTCCGCAGC ATAGGAATAT GGGGAATGCC 
CGGCATAGGC AAGACAACTC TTGCTAAAGC TGCTTTTGAC CAACTCTCTG 
GTGACTATGA GGCTTCTTGT TTCATCAAAG ACTTTAACAA GGCGTTTCAT 
GANAAGGGAC TTTATGGTTT GTTAGAGGCA CACTTTGGGA AAATTCTTAG 
GGAAGAGCTT GGCATAAAAA GTTCGATTAC AANACCGATC CTCCTTAAAA 
ATGTTTTACN CCATAAAANA GNTCTTGGNC GNTCTTGATG ATGTGTGTAA 
GCCTCTNAAT GCANAGTCCT TTNTTGGAGG G

3 prime edge [+] show sequence

Chromosome: 3; Position: 19125694 [Map]; Strand: c
- AT3G51560.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon1 (CDS)
- AT3G51570.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -664; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
GCATGACTTG GATGACGAGT ATTTCTCAGA GAAAACCACT ACAGAAGCCC 
TAGACGTCTC CAACTTGGAG AATCCATTGC TTTCCGAATC GGAGCCGTTT 
TCTCCGATGA ACGAAGATAT TCCTCTGCGG CGGAAAGCNG GCGCAGAGGT 
GGCTGACAAA AGAGTACCGC ACCATATCCT CACTTCTGTC GAAGCTGATG 
TAAACATCGC TGCAATCCAC CATGATTATT TAGGCGCGTT TTTCTTGCAC 
CTAGATTTAG GAGATTTTCA GTTTGGGTTT TTTTTTTCNT TTAAACNGGA 
TCAAGTCGGA NTTAGNGAAT TACCANCCNG GGCCGTCAAC CACCCNNGCC 
CCTANAGGG

AT3G51560.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G19520.1); Has 29226 Blast hits to 20052 proteins in 857 species: Archae - 16; Bacteria - 1964; Metazoa - 4192; Fungi - 293; Plants - 21872; Viruses - 18; Other Eukaryotes - 871 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G51570.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45250.1); Has 19036 Blast hits to 14178 proteins in 545 species: Archae - 8; Bacteria - 1068; Metazoa - 1899; Fungi - 85; Plants - 15364; Viruses - 2; Other Eukaryotes - 610 (source: NCBI BLink).
Link: InterPro Scan - TAIR