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12-1496-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22372183 [Map]; Strand: c
      • AT1G60780.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
        Distance: -24; Region: promoter
    Flanking Genome Sequence: 12-1496-1 - 5-prime edge 
    CCCGACCCGG NCCGNCNACC CGCNTNCCCT ACNGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCTTT GACGGAAAAA GTAAAACGGT GTCGTCTGGG 
    TGAAACGCAG AGCTCTTTGC TTCTGAATAT TATTATTTTC TTAAATTCTT 
    CCGTTTTTTT TTTAATCCAN CCNCAAGTAA CAATAACCGA AATCATCANA 
    TCGCCANAAA AAAAAANCAN TNGNAAAAGG GNAAATNNGN CCNGGNAAAA 
    ANCNGNGNNA ANCCCCNNNN AAANGNGGCN NCTTTTTTTT NNCCNNAAAA 
    CCNTNTTTNC NTNAAANCNC NCTGGNTNAA NCNNCCCCNT TGGGATNNGA 
    TNCAAANCNC CNNGGGAAAA ACNNGGNNGG NNNGGCCNCG GNTNTGTTTN 
    NGCNCNANNT CANGGGGCGG GNNNNCNNNG GGNGGNATNN TCGGGGNNAN 
    GNNNCCNNNG NTAAANCCGN NCNATTTTTN CNTAACCNNN TCNAAAAANN 
    GGGTGGTNCN GANCTNCCNN TNNCCNGAAA NGGANCTTNG GTTNNTGGNC 
    GGATCCCNGG AAAATNGCCN AAAAANCCCA GNNTTANNGN ANCAAACTTG 
    GGAAATTTNG NGNGGNAAAA ANNNCCCNCA TGGGGAATNG AANCNTTTNA 
    AAAANAAGGG ATCGGGGNCC NTTTCCTCGN NCNGGGNAGG GAATTTTGNA 
    AAAAAAGGGN TNCCCCNNAA CCNTTGGGNA CCNGACGCCN NTAAANTTTT 
    TGGGAAGANN NNAACANCTT TTGAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22372179 [Map]; Strand: c
      • AT1G60780.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
        Distance: -20; Region: promoter
    Flanking Genome Sequence: 12-1496-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TTTAATACCA TCGAAAGTAG AAGTCTAGAA GAAGGAGAGT GAACGAAGAA 
    AGTCATCATT AAAGAAGAAA GGCCCATTGG GTCATTATAT AAAGTCAGGC 
    CCATATAGAG ATAGGTTTCG TAGGTTAAAA TTATTAGGTT AACGATAAGT 
    AGTATAAAAA TAGGTTTCTT AATCAATGAT AGAAGTAAAA CCCTAAAATC 
    GAATATATGC NTTTGTTCGC AAAAACTTTA GGGGAATCTA GGGTTTAGTG 
    TAGTGTCACC ACCATGAAAT CGTGAGGAGT AGTATCAAGT ATGAACTAGA 
    AAACTGTCAT GGAGTATGAT CGAATGTTGT GTACTCATTT TCGTGGATAT 
    GAAAAGATAT GCAACATTTG ATCATTCTCC ATTATAGTAT TCTAGTTCGC 
    TATATAAAAT TTCAATAGAA CACTGCAACA TGAATTGTTT TGTAACATGA 
    AATTGTGAAT TTGTGATGTT ACCGGTGTGA GTGCATTCGT TGTTGGATTG 
    ATTAGTACGA TTGCATACTT TGTGTGATTG ATTGGTACAC AATGGAAGCG 
    TAATTGAAAG TAATAGATTT CAAACCTTTC TAAACCATGT AGTTAACTTG 
    AAGCTACCAN CCCGGGCCGN NGACCACCGG NNC

AT1G60780.1

Model type
Protein coding
Short Description
Clathrin adaptor complexes medium subunit family protein
Computational Description
HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink).
Link
InterPro Scan - TAIR