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12-1520-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29556965 [Map]; Strand: c
      • AT1G78580.1 - [+] show detail - trehalose-6-phosphate synthase
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-1520-1 - 3-prime edge 
    CTCATCAGGC ACATTAACTC CAGCCCATCC TATCCATCTG GCCTCAAATT 
    CCTTTACACC TTCATAAGTT CATTCATTAA TTTTATGTCA GCCTACTAAA 
    ACCTTGTTTC ATGTTGTTCA TTGCTGTCTT GGATACNTGA ACCAGTGATT 
    AAAAATGAGA GCAGGAACGA TAAGAGATTT ATGACTTACC TAAGAGAGCA 
    CTGACTAGAC CACCAGCACT GATCTCAAGA GACCATGAAT CTTCACCTCT 
    TCTCACGGCA GAAACTGGGA GCCTGTTAGC CACTACAAGT AGTCGTTGCC 
    TATTATAAGG CCTAACTTCT TGCCTCTCAC ACGCATCATC GTGCGCCATT 
    GCAGCAGCAG CCCCTTCCAA GTACTGTTCA ACATACTGCC TTGAACTGTC 
    ACCTTCTAAA CGCAAGTCAT TCTCAGAGTT CTCGGAACTG CCAGCAACGT 
    CATTAGGATT ACGAGCTCGG TTGCTCTTCC TCTTCTCTCT AAGCTCTCTA 
    TCTCTCAAGA GGCGTTCTGT TCGAGAGAGT GGGATATGAG AAGAACTGCA 
    GTTGTACTTA TTTCCAGGCA TACGCTCACA CCAAAACAGA ACCAAAACAC 
    CACTCTATCA ACGGTAACCT GCATTTTTTG TTGTCAAAGC AAATCAGGAC 
    ATATCAAGAA ACCAAGTGTC ANGTAAAAAA CATAANTTAC NTTAAGAAGA 
    AAANAAGGGG GNA

AT1G78580.1

Model type
Protein coding
Short Description
trehalose-6-phosphate synthase
Curator Summary
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.
Computational Description
trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink).
Link
InterPro Scan - TAIR