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12-1560-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13322974 [Map]; Strand: w
      • AT4G26330.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 12-1560-1 - 5-prime edge 
    CTTGATCCTC TCTGGTGGTT CGATGAAGTC CACTGACCCG TTTGATATTG 
    GTGCCGGGCA TATAAACCCT TTGAAAGCCA TGGACCCAGG TCTGGTTTAC 
    AATACCAGAA CCGACGACTA TGTGCTCTTC ATGTGCAACA TTGGCTACAC 
    GGACCAAGAA ATTAAGTCCA TGGTTCTCCA CCCAGAGCCT TCGACAACAT 
    GTCTTCCGTC TCACTCGTAC CGAACAAATG CAGATTTCAA CTATCCGTCT 
    ATTACCATAC CGAGCTTGAG ATTAACCAGG ACAATAAAAC GTACTGTAAG 
    CAACGTCGGT CCAAACAAAA ACACAGTTTA TTTCGTGGAC ATCATTAGAC 
    CCGTGGGAGT GGAAGTTTTG ATCTGGCCGC GGATTCTGGT GTTCTCGAAG 
    TGCCAACAAG AACACTCATA TTATGTTACA TTCAAGCCCA CTGANATTTT 
    CTCTGGTCGG TATGTATTTG GGGAAATCAT GTGGACAAAT GGGTTACATC 
    GAGTTAGAAG TCCGGTGGTT GTGTTCTTGA GCAACGCTGG TTTTCTTGCA 
    AGCAGTTAAA TTAGACGGAA AGTCACTACC GTAGGGCTCA AGTTGAAAGA 
    GCTATGGGTT NGTTTCTTTT GTTTGANATT TCCCGGGCCC ACTTTATAAA 
    TAGGAACTAT AAAAATTGCC NCAACTGGTG AAACTTGTTT AGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13322858 [Map]; Strand: w
      • AT4G26330.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 12-1560-1 - 3-prime edge 
    GGATCAAGTC ATAGCTTGTG TCTCTTGTAT ACGCTGGAAA CGGAAATAAG 
    ATATAACAAT ATCAGACTTG GGTTTGTAAG AACAACATAT GAGGAGGGCC 
    TATTAGAAAT AGAACCTGTG GTCATGATAG CGCTTCTGAT AGCAGAAGGT 
    GACCAGTCAG GGTGAGCTGA CTGGAGAAGC GCCATAACTC CAGCCACATG 
    GGGACATGAC ATTGAAGTTC CCGACTGGAA ATTCCACTCA ATAGATCGGT 
    GGTCTCCTGG TAACAGAGTA GGTGGAGTTC TAGGAGGCCA TGCTGCTAAT 
    ATCCCAATGC CAGGAGCTGT AATATCTGGC TGCATAAACC ATCGATACAC 
    CAAAAAAACA ATATTCAGTA AAGTGACAAA TTTGGTTCTG GTTTAAACTC 
    ACTATATCTC AAATACTTCA ACACAATTGC ATTCTCAAAC ATACAACTTG 
    ATGCAACAGA CTGAATGAAC CAAAAAGTAG ATGATTGTAC CTTGAGAATA 
    TCAGGTGATA GTGAGCTAGG TCCTCTTGAA GAGAAATATG CAACGGAGGG 
    TGCTGTAGTC TCTCCGATAA CCGTTTTGCT CGGTCCAATT TTCACCATTG 
    GCACTCTTCA TTTTTACCAA AAGAATTACC ANNCCGGGCC GTNGACCACC 
    CTGCCCCCT

AT4G26330.1

Model type
Protein coding
Short Description
Subtilisin-like serine endopeptidase family protein
Computational Description
UNFERTILIZED EMBRYO SAC 17 (UNE17); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, double fertilization forming a zygote and endosperm; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR