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12-1633-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 260593 [Map]; Strand: c
      • AT4G00620.1 - [+] show detail - Amino acid dehydrogenase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-1633-1 - 5-prime edge 
    CTTCTGGCCG TGGCTGCTGC ATTCGCTCCT CTTCTTCTCC CATTTCTTCC 
    ATTTCCGGTA ATGATTAAAC CTTTTGACTT AATTGAGCAC CAAATTTGAA 
    CTTGACATCG ATTGAAATTT GTAGACAATT AGACTTGTTC TTCCCTGGAA 
    AATTGAGTTT CTTTATTCTC ATGTTGGAAT CATAAAATTT TTTTTTTTTT 
    TTNGGGNCCC NGGNANNNAA AANAANGGGG GGGNCCANTN NAAAAAANGG 
    NANGGGGGGG GGNAAAAAAA ATNANAANNA AACCCCCNTT GNNGNTTCAA 
    AAAANNANGN AAAAANNGGG GGGNANCCNG GGNNAANNAA AANCCCTNGG 
    GGGGNAAAAA AAAAATTNNC CNCNTTTNGG GNGNAAAAAA AAAAANNNTC 
    CCCCCCGGGN CNGGAANCNC CGGGNNCNTA NAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 260709 [Map]; Strand: c
      • AT4G00620.1 - [+] show detail - Amino acid dehydrogenase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1633-1 - 3-prime edge 
    GCCAGAAGCA GTGGTCTGTA AACGGAGTTG GCCGACGCAT TGACGGAGGA 
    GGAAAGTACC GCTGCTTCGG TTCAAATGGA TGAGACGCGA CGTCGTGGTG 
    GAGGAGCAAT CGGTAAACAT CATCGACGCC ATTTTTATAC AAGGAAAACA 
    GAACAATAGT CTGCTCGTCG TGGCTGAGTT AAAAAGGAAG AAGGTAATGG 
    TGGAGACAGG AAGACTAATG AAGTCTTTTA ATTTGTGATC TAGAGCAAAG 
    CAGAGCAGAG AAGAGACGAT GAATTGAAGA AGATAACTTC GTCGTCTACG 
    GAGAGTCGGA GAGACTAGGG TTTCTTCTTT TGATATCAAC AAGGGTTTAA 
    ATTCATTCAA ATCACAAAAG AAACCGGTTT GTTGATTTCA CCTGAATTTT 
    CCGGTTTTAT TATACCAGTC TTTCGTTTTC TTTTCTTTTT TAATAAATCC 
    AATCGGACCG CTTCATATTT TTAGTAGCTT TTTAATTTGA TTAGTCGTCT 
    TAAACTCAGA TTAATCATGT AATTAACACT GATCAATATA TAAACAATAC 
    ATGTAAGTTC GTTGACTTAC GGTCCATTCT CTATTTGNGG TCTAAAGTAC 
    CACACTAGAT ATATATACCC CTTGTGATTT AACTCGAGAG CTCGAACAAT 
    CAAAGCTAAA TGTATTTACA AAGTGGGTAT CANAGCAAGT CATGTTATTT 
    GTGATTGCCC AAGATTGTTG AAAGGG

AT4G00620.1

Model type
Protein coding
Short Description
Amino acid dehydrogenase family protein
Computational Description
Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR