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12-1647-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 12449501 [Map]; Strand: w
      • AT3G30775.1 - [+] show detail - Methylenetetrahydrofolate reductase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-1647-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACAT GATGTCTAGC 
    GAAGCTAGCT TGGCGGATTC CCTGGGTTGC AAGTCGCCAG TCCACGACAC 
    AATTCAGGAT ACTCACTCTT GTTACAATGA TTGTATGACA TTCCTGATGG 
    AGAAAGCATC AAACGGTTCT GGTTTCGGTG TCGTTCTCGC AACACATAAC 
    GCNTGATTCN GGGTAAGCCA TTAAATCACA TTGTAACCGC GGGTTTTTTA 
    GCGCTTTAGT TAGAGTGAAA TGGTTTACTA ATTGTAGAAA TGTTTTAATC 
    TCAGGGAGAC TTGCGTCGAG GAAAGCGAGT GACCTCGGGA TCGATAAACA 
    GAACGGGAAG ATAGAGTTTG CACAGCTATA TGGTATGTCA GATGCATTGT 
    CCTTCGGGTT AAAGAGAGCA GGGTTCAATG TTAGCAAGTA CATGCCGTTT 
    GGACCCGTCG CAACCGCTAT ACCGTATCTT CTCCGACGCG CTTATGAGAA 
    CCGGGGAATG ATGGCCACCG GAGCTCATGA CCGTCAACTC ATGAGGTAGT 
    TAACACCCTT GATTAGTTCT TTAACCATAT AGTTTAGTTA ATAGATTTTG 
    GATTTGGTTT ACTAATGTTG GTATTGGTTA TTGCAGGATG GAACTTAAGA 
    GGAGATTAAT CGCCGGGATT GCGTAAAGAG AGAGTATGGA GCCATTAAAT 
    GAAATTGGGG AAAATGTAGA TGAATAAATT TCTTCTATGT AGTTTAAGAA 
    ATTGGAAAAC AAAAATTTTA ATNTA

AT3G30775.1

Model type
Protein coding
Short Description
Methylenetetrahydrofolate reductase family protein
Curator Summary
Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element.
Computational Description
EARLY RESPONSIVE TO DEHYDRATION 5 (ERD5); CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT5G38710.1); Has 2269 Blast hits to 2250 proteins in 878 species: Archae - 1; Bacteria - 1355; Metazoa - 205; Fungi - 217; Plants - 85; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink).
Link
InterPro Scan - TAIR