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12-1649-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17752459 [Map]; Strand: w
      • AT2G42610.2 - [+] show detail - Protein of unknown function (DUF640)
        Distance: 2019; Region: intergenic
      • AT2G42620.1 - [+] show detail - RNI-like superfamily protein
        Distance: -3681; Region: intergenic
    Flanking Genome Sequence: 12-1649-1 - 5-prime edge 
    GAGACAGCAT GGTGTACTTT GAAGGATTAG ATTTTTAAGT TACGGAACAC 
    AAACATTTAC TTCACGTCAC CACTTATCTA CTTCCACGTC ACTCTCTTTT 
    CCCACCACTT CTTTTTTGGC CATTCTCATT ACTCTTATAA CTAATTTTCT 
    TTCGGTCATT AAATTCAAAA CCCGGGCCCA GGCCCACCAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17752375 [Map]; Strand: w
      • AT2G42610.2 - [+] show detail - Protein of unknown function (DUF640)
        Distance: 1935; Region: intergenic
      • AT2G42620.1 - [+] show detail - RNI-like superfamily protein
        Distance: -3765; Region: intergenic
    Flanking Genome Sequence: 12-1649-1 - 3-prime edge 
    AATTGAAAAC GGTAGAGGTA TTTTACCGAC AGCCTGTCTC ACTCTCACGA 
    CGTTGCCTTG CTTGTCGTTT TTCTCTTTTT TTTCTTTCAA AGATTGATGA 
    CGTGGACGTC TAGTAACAAA GCAGTTTCTA GAATT

AT2G42610.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF640)
Computational Description
LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G42620.1

Model type
Protein coding
Short Description
RNI-like superfamily protein
Curator Summary
The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses.
Computational Description
MORE AXILLARY BRANCHES 2 (MAX2); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1122 Blast hits to 776 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 391; Fungi - 21; Plants - 636; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Link
InterPro Scan - TAIR