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12-1693-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30245109 [Map]; Strand: w
      • AT1G80450.1 - [+] show detail - VQ motif-containing protein
        Distance: -326; Region: promoter
    Flanking Genome Sequence: 12-1693-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT TATAGATAAT 
    TCGTGATAAT GAAACATTTA GTCGGTTCAT TGTTGACTCC GCAAGCAACT 
    TAATTGATAT TTTCAAAGCA TTCCACTAGT CTATAATATC CCACTATATA 
    TTTTTCTGTA CACAAACGTT ATATACTTTA GACGTGGTTG ACGAATTGAT 
    ATGTGATACA AAAGAAAACC TAATGTTATA ACCTTTGTAG GCAATTGCGT 
    AATGATTGAT CCCTGGCCGT GATCATATGA TAGTATGTAA TAAGCGTAAT 
    TACCACACGT CCATGATTTT ATGAATTTTC GAATTTTGAA TTTCCCAAAG 
    AAATAAATGC TGTGACGAGA AGGGCATCAG AACTTTCCCC TACAAAATTT 
    ATGGAGGTTC AAATTTTGAA AAGTAAAAAA TTAAATGACT TCAAATCCGT 
    ACATTGTTGA GTAATTATAA TAATATAAGC GATAAAGTTT TTGGTGTTGT 
    TTGTTAGAGA TTGTGATTAC TTTTAAAAAA GTACTTCTTC TTACGTTACA 
    TTTTATATTG TTAATATGAG AGAATACATC ATGCATCCGA TTTAATTAGT 
    GGAGGACAAA GATAAATAGA AATGTTCAAC ATATAAAACA ATCTGAAAAA 
    GAAAAGAGAA CAAAATTAAT AGGCTTTTAG TTTTAGGTTG CGTGAAGGAA 
    GTAGGCAAAA AGCGAAGATT TTTTCCCTCC TTTTTCTTCA CACTTCACGG 
    TTTTTTCTTT GGTCCTTANC CTTTGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30245006 [Map]; Strand: w
      • AT1G80450.1 - [+] show detail - VQ motif-containing protein
        Distance: -223; Region: promoter
    Flanking Genome Sequence: 12-1693-1 - 3-prime edge 
    GAATTGGCAA CACTTCTAAT AATGTATGGT TAGCTTGGGC GTTGACTTTG 
    ACATTATAAT CATCTAGAAA CAGTTCTAAT CCGTATTCAA ATCACAAATA 
    TTAGTGAATT ATTAGCAACC TAAACATATA ATTTATTTTT TAGTCAACNT 
    TATCAACTAA AGATTCTAGA CGTGCAAAGT CAAACAATAA TAGCCACTTT 
    GGTTAATTAC TAAATTTAAT ATGTTGGCAA AAAATGTCAA TAAAAACACA 
    CAAACACACA ATAGGGTCTT CTTTAAATAT ATGTGCAGTA GGCAGACGAA 
    TGTCTTTTAG ACAAAAACAA AAACAAGCT

AT1G80450.1

Model type
Protein coding
Short Description
VQ motif-containing protein
Computational Description
VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G28280.2); Has 128 Blast hits to 128 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR