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Mutant Lines
12-1717-1

12-1717-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 22695629 [Map]; Strand: c
- AT5G56040.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 0; Region: exon1 (CDS)
- AT5G56040.2 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 0; Region: exon1 (CDS)

CTCGCAGTTA CCAATCTCCC AAGGAAGCTC TCCTCTGAGA TTCTTGTTAC 
CACCTGCACG GAAGATTTCT AGATTCTTGA GTTCTCCGAT GGTTCTAGGA 
ATCTCTCCGG CGAGTTTATT GTCGAAGAGA GTGAGCTCGA TGAGGTTAAC 
GAGATTCCCT AACTCCGATG GAATCACACC TTCGAGATTA TTTGTGTTGA 
GAGACAGAAT CTTTAGTTTC TTGAGCTTGA AGATATCCAC AGGGATTTCA 
CCAGAGAGAG AATTATCAGC TAAATCAAGA ACTTCTAGCT CCGACAAGTC 
TCCAAGCTCC TTAGGGATTG AACCAGTGAG ATTCACGGAG GTTAAGCTGA 
GCAAAGTCAG AGACTTTATC TGTCGGAGAT TCGTCGCCGG TAACGGACCT 
TGAAAATCCA TGACTTGGAG TTGTATCTCC GAGACTTGAC CTCTTTCGTT 
GCATTTGATT CCCACCCATT GACAAGGATT CGATTCGGAG GCTTTCCAAG 
AAGATAAAGC GTCTCCGGAG ATGTTCAACT GAGATTTCCA TGAGAGGAGA 
GCTAGACCCT GTTCGTCTAT GGAAAAACAG GGGATGGAGA AGAAAAGAGA 
GGAGTGAAAA AGAAGGAAGA GGAAGAAGCN NAATCTAGGG TTACGTGGCA 
TTGGTGAANA GGGAGAGGAN NANANNAANN GNNANATNNA NAGANAGGGG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 22695698 [Map]; Strand: c
  - AT5G56040.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
    Distance: 0; Region: exon1 (CDS)
  - AT5G56040.2 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-1717-1 - 3-prime edge
```
AATTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
CCGAGAGTCT TGTGACTTTA GGTCTCGCCG AAACAAGTCT CTCCGGTAGA 
CTTCCGGCGT CGATCGGAAA CCTGAAAAAG GTTCAGACAA TAGCTCTTTA 
CACGTCACTC TTGTCTGGTC CAATCCCTGA TGAGATTGGA AACTGCACAG 
AGCTTCAAAA CCTCTACTTG TACCAAAACT CAATCTCTGG ATCGATTCCT 
GTATCAATGG GACGTCTCAA GAAGCT
```

AT5G56040.1

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Computational Description: Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G26540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G56040.2

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Computational Description: Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G26540.1); Has 231331 Blast hits to 125911 proteins in 4380 species: Archae - 141; Bacteria - 23597; Metazoa - 71861; Fungi - 8804; Plants - 101197; Viruses - 340; Other Eukaryotes - 25391 (source: NCBI BLink).
Link: InterPro Scan - TAIR