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12-1748-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 119115 [Map]; Strand: w
      • AT2G01200.1 - [+] show detail - indole-3-acetic acid inducible 32
        Distance: 0; Region: intron4 (3UTR)
      • AT2G01200.2 - [+] show detail - indole-3-acetic acid inducible 32
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 12-1748-1 - 5-prime edge 
    ATTTGGAGGA ATGTTGGGGA TGTTCCATGG AAGTAAGCTC TTACATTTTC 
    TCTATACAAA AACTAAGCAT TTTAAGTAAA CCACTTTGTA ATTTGTCTGA 
    AACCTGTAGG GAGTTTGTCG AAAGCCGTGG ATCGGATGCG AATCGCAAGA 
    AGAAACGATG CTCTTCTTCC CTTTTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 118999 [Map]; Strand: w
      • AT2G01200.1 - [+] show detail - indole-3-acetic acid inducible 32
        Distance: 0; Region: exon4 (CDS)
      • AT2G01200.2 - [+] show detail - indole-3-acetic acid inducible 32
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-1748-1 - 3-prime edge 
    CTCCAAATGC CTTCTCTGTC TCTGTAGACC AAAGAGAACT CAGACTCAGT 
    CTGGAACAAC CTCAATCCCG ACACGGTCTG CATCCCTGCA GATTCGAATT 
    AATGTGGCAA AACCTTCTGA AACATACTTG TAGCTGGAAG CT

AT2G01200.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 32
Curator Summary
Belongs to auxin inducible gene family.
Computational Description
indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01200.2

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 32
Curator Summary
Belongs to auxin inducible gene family.
Computational Description
indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR