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12-1786-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2339037 [Map]; Strand: c
      • AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-1786-1 - 5-prime edge 
    CTTNGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
    TTTCCCATCC TACTTTGTTC TCTCTGCGCT TGTCTCCCAA ATTCTCAGAT 
    CTAATCAGAT CGACGATTCC TGATTTCATC AGCTTCGAGA GAGATCCTTC 
    TTTTGTTCTT CGTTGAATGT CTCGCCTCCC AGAACGAGGA GTTTCAACAA 
    TGGTGGAACA AGCAACGAGA TAGGAACAAC CACGACGTTC TTTACGCCGG 
    CGACGATGAA GCATTCCTCA CCGTTGAAAT CCGTACTCCG GCCACCGTTG 
    ACCCTGATAA GGATCGGATC

AT3G07330.1

Model type
Protein coding
Short Description
Cellulose-synthase-like C6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR