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12-2048-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17521981 [Map]; Strand: c
      • AT4G37235.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 2196; Region: intergenic
      • AT4G37240.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: -2480; Region: intergenic
    Flanking Genome Sequence: 12-2048-1 - 5-prime edge 
    GTCGAAGTAA TGCTTGTTAG TTGTAACACA CTCATAATCT GTGTTTTAAT 
    TTTGTTGTAC AAAATAATGC CTCTTTTCTG TTATAGATAC TTGTGTCGGT 
    AATAATGTGT GACTATTTGG TTAATTAGNG TTTCTTTTTG TTTTTGTAAT 
    TTATCGTAAA CAAACATGAG CTTGCAAAAA TAACTAACAT TATTATTANA 
    AAANTTTGNA TAAACGTANA ACAANAAAGC NAACGTGACA NGCCCCATGC 
    TTTTGNATNA ANNTNCCNNC CCCGGGNCGG GGNNAAAANA ANGGCCNGGG 
    GGNANA

AT4G37235.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37240.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR