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Mutant Lines
12-2058-1

12-2058-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 1736671 [Map]; Strand: c
  - AT3G05820.1 - [+] show detail - invertase H
    Distance: -914; Region: promoter
  - AT3G05830.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: -6; Region: promoter
  - AT3G05830.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
    Distance: -9; Region: promoter
Flanking Genome Sequence: 12-2058-1 - 5-prime edge
```
CTGAAGATGA GGAGAAGAAA AAAGAAAAAA AATTAGTTTT TTTTTTNGGG 
GGGGCNTGNN ANCAANGGNG GTNGNCCTTT AATCCANAAA AAATTAAANG 
AANAGTNTTT CNCAATNCAA ATNTNTNTAA NAANAATCAA ANCAANGATC 
GGGACTTTNC NTGACCTNTN ACTNGAAGCT NCCANCCCGG GCCGNNNNCC 
NCCCGNGCCC TNNAGGGNGT CNNATTACCC CNCCCGGGGG GGNTAAAAAC 
GGGGNCCNTA A
```
3 prime edge [+] show sequence
1. Chromosome: 3; Position: 1736744 [Map]; Strand: c
  - AT3G05820.1 - [+] show detail - invertase H
    Distance: -987; Region: promoter
  - AT3G05830.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: 0; Region: exon1 (5UTR)
  - AT3G05830.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 12-2058-1 - 3-prime edge
```
ATTTAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCTTCA 
GAGTTTTGAG ATTTGTGATT GCCTCCATGC AAGAGCTGAA TTAGCCGAAT 
CTGGATGTCT TATTCTGAAA AAACGACGGT GGATC
```

AT3G05820.1

Model type: Protein coding
Short Description: invertase H
Curator Summary: Encodes a putative plastid-targeted alkaline/neutral invertase.
Computational Description: invertase H (INVH); FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 687 Blast hits to 684 proteins in 100 species: Archae - 0; Bacteria - 137; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G05830.1

Model type: Protein coding
Curator Summary: Encodes alpha-helical IF (intermediate filament)-like protein.
Computational Description: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26770.1); Has 58119 Blast hits to 29878 proteins in 2086 species: Archae - 743; Bacteria - 6396; Metazoa - 31988; Fungi - 4358; Plants - 2396; Viruses - 181; Other Eukaryotes - 12057 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G05830.2

Model type: Protein coding
Curator Summary: Encodes alpha-helical IF (intermediate filament)-like protein.
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26770.1).
Link: InterPro Scan - TAIR