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12-2170-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23820450 [Map]; Strand: w
      • AT1G64170.1 - [+] show detail - cation/H+ exchanger 16
        Distance: -2157; Region: intergenic
      • AT1G64180.1 - [+] show detail - intracellular protein transport protein USO1-related
        Distance: -1066; Region: intergenic
    Flanking Genome Sequence: 12-2170-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG 
    TATAAAAGCA TCATTAGCGG CAACTAATTT AACCAACAAA AAATATATGG 
    TAAAATAAAG TTGGTAAAAA ATATTAAATA TATTTAGTTT TCTTAGACCA 
    AAAAATAATC ATGTGGTCTG GAGAAACCAT GTTAGAATT

AT1G64170.1

Model type
Protein coding
Short Description
cation/H+ exchanger 16
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 16 (CHX16); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: stem, male gametophyte, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 10345 Blast hits to 10314 proteins in 2156 species: Archae - 371; Bacteria - 8080; Metazoa - 56; Fungi - 195; Plants - 675; Viruses - 0; Other Eukaryotes - 968 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G64180.1

Model type
Protein coding
Short Description
intracellular protein transport protein USO1-related
Computational Description
intracellular protein transport protein USO1-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41620.1); Has 2997 Blast hits to 2464 proteins in 355 species: Archae - 17; Bacteria - 245; Metazoa - 1676; Fungi - 267; Plants - 224; Viruses - 17; Other Eukaryotes - 551 (source: NCBI BLink).
Link
InterPro Scan - TAIR