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12-2245-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22428384 [Map]; Strand: c
      • AT1G60910.1 - [+] show detail - pre-tRNA
        Distance: 147; Region: intergenic
      • AT1G60913.1 - [+] show detail - Rapid alkalinization factor (RALF) family protein
        Distance: 221; Region: intergenic
    Flanking Genome Sequence: 12-2245-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC AGACTCTTGT GAAAGCATGA CATGTAACTT 
    TCGTTGTAAA ATAAAATAAA AAACAAATGA GCTCAGATAT GAGGCTATAT 
    CATCCGATTA ATCGGAGAAT TGCTAAGGAC CCAACCTTAG CTTAAAGCAA 
    ATTTCATCAA CGCTCAAATG CACCAGCGGG GAATTGAACC CGGGTCTGTA 
    CCGTGGCAGG GTACTATTCT ACCACTAGAC CAGTGGTGCT ACTTGCCTAC 
    TATCTTACTT TTCTAATATA AATCCAGTAT TTCACGTTTA GTGAGAGCAA 
    TTGCACATGT TCCAGCATTG CATTTAGAAA CTGATGTGGT TTGGTCTTTT 
    AGTTTTTAAA AGAACAATAA TATAAACTGA TGTGGTTTGG TTAGTGTTCA 
    ATGAAACCAA AAGCTACTAT TACCAACACA CACCTTAATT GATTGTGCCT 
    GGACAAGTAC TATTGCAGTC AGATTCTAGA CAAATTTCTG TACTATTGCA 
    GTCAGATTCT AGACAAATTT CTCCATTTAG TAGAGAGAGA ACTAAACATG 
    TAAAAAACTT AAAAATAAAA AAGAACCAAA CTTGTTGCTA AGAGATCCAA 
    ACTAAAAGCT ACCANNCCGG GCCGTNGACC ACCGGNCCCN NNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22428377 [Map]; Strand: c
      • AT1G60910.1 - [+] show detail - pre-tRNA
        Distance: 140; Region: intergenic
      • AT1G60913.1 - [+] show detail - Rapid alkalinization factor (RALF) family protein
        Distance: 228; Region: intergenic
    Flanking Genome Sequence: 12-2245-1 - 3-prime edge 
    GAAAACNNGN NGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCNT 
    CGNGACACAT CTGCANGTNA CACGNAACTT GANGTTATGC CTGNNAACAC 
    ATTAATTTAT NATTTATNAA AATATATATA CACAATANTT TGAACGTTAA 
    AAAAAATGAA GGAATTGTAA TATAATTAAA ATTACGNTAA TGTANCANGT 
    TCCATATCAC ATCAATAATG TAGATNANTG ATNAATNTTT TTTCATATTT 
    ANTNAAAAAT GATTANGNNT NTATGAATNC NTGANNAANT ATNATACTTT 
    TCACTGATAA CAATGTGTAG TGTTTTGACA ACCAGGAGGA AGATGGTACT 
    GGTTGACTGG AACTCTGACA CAATTTTTGG GATCTTGAGT GCAGTCTGGA 
    ACTCTATCTT TTGCAATAGC TCTATATTNT ATGTATCTTC CTTCTCCGAA 
    TCCGCTGAAC AATGATANTA CAATCACTAT TTGACACAAA GAANAGACTA 
    GNANGACTCA TTTNNGNGTG CNGCCATTGT TTAACAAACC GAAAAATGAN 
    GTATTTAANC TTCTNGGTCT TTTTCTTTGT TGNTGTATTN TGCANCTTGA 
    NNNGGGCCAT TATTGGGTTC TTTTNNNTTC NNNANCNGNC NACCCGNGGN 
    GNGANANCTN AAGNNCCAAA NNGNNNGNCT NATANNNTAN CGCCCCNNCN 
    NCNTTTATGC TNATNTTTTT TTTCNATTTT GTNNNCNTNC GANGNCNTCN 
    NGGATNNGGN CCCTCCCTGN NTTTNCNNNC NANACCNCAG AGCATNCNTN 
    NNTGCNTNNG NCNCG

AT1G60910.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: GCC)
Link
InterPro Scan - TAIR

AT1G60913.1

Model type
Protein coding
Short Description
Rapid alkalinization factor (RALF) family protein
Curator Summary
Encodes a Rapid ALkalinization Factor (RALF) family protein
Computational Description
Rapid alkalinization factor (RALF) family protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: RALF-like 7 (TAIR:AT1G60815.1); Has 11 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR