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12-2425-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30081022 [Map]; Strand: w
      • AT1G79960.1 - [+] show detail - ovate family protein 14
        Distance: -473; Region: promoter
    Flanking Genome Sequence: 12-2425-1 - 3-prime edge 
    CACACAAGCG ATGTGGGACA AAATAGACGC ACACCATTAT ACTCCGGTTT 
    TGGGCCTCAA AATATGGGCC TCGGAAACAC TTGCTACTTA ATTATCCGCT 
    TTATCGGGTT CTCTTCATTT GTTTTCACTA TTAAAGATGT TTAATTTTTT 
    GTCAATGATA CCTTAATTGG TACTTTAAAC ATTGAATTGA CTCAAGTACA 
    GTATCATCAA CTCTGTGTTT AGATTAAGCG CGTGAGCTTC ATTTCCAATA 
    CAAAAAAAAG AACAATTACT ATTCAACGAT GCATTGAATG CAGAATCTGG 
    AACTAATGGA AACAGATTTA ACACAGAAAC AAATCTAAGA AAAAAACTTG 
    CCTATTAATT AATGAGATTA CCAACAACGT AGCGTTGAAC AGTTTCAGAT 
    TTGACCAATG AACCCCTGTT CCCTCTTAAT AGCATCAAAT CTCCAANAAT 
    TGGTTTAAAA TTAAAGAATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30081138 [Map]; Strand: w
      • AT1G79960.1 - [+] show detail - ovate family protein 14
        Distance: -589; Region: promoter
      • AT1G79970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -940; Region: promoter
      • AT1G79970.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -940; Region: promoter
    Flanking Genome Sequence: 12-2425-1 - 5-prime edge 
    CTTGTGTGAC TTTAGAGCAC AAAAAGCTAG TGCTATAAAA AAAATCTCAC 
    ATCCTCAAAA GAAAAGCATT TTTGCGCTTG GGGCAATGAC GCAGCTAATG 
    AGGTACTAAC CGAGGCGCCG TCTATTGCTG GTTGAAAACT ATTTCCAAAC 
    CCCCTCATGG GCCTGGGCTT GACCTATGGC CTTTGANAAT TTCTGGAAGG 
    GCTCCCTTCG GGGTAAAGCC CTACAAATCT TAAGTTCAAA TTGTTTCTAT 
    CCTTGGTAAG TTATATTATT AATATAGGGT TTGGTCATTG TAAAGATTGA 
    NAATCGTAAT GTATTTGGGG GAGTCAAATT AAATGTATTT GGGTGAGTCA 
    AATTAGGTGA ATT

AT1G79960.1

Model type
Protein coding
Short Description
ovate family protein 14
Computational Description
ovate family protein 14 (OFP14); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 13 (TAIR:AT5G04820.1); Has 451 Blast hits to 451 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 29; Plants - 394; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79970.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79970.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR