1. Home
  2. Mutant Lines
  3. 12-2430-1

12-2430-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24855613 [Map]; Strand: c
      • AT1G66630.1 - [+] show detail - Protein with RING/U-box and TRAF-like domains
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-2430-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCAATT 
    CGCCACATGA TTTTCAGGGC TCACTTTTTG AATCTTATTC ATCTTCTTGG 
    ATTCAAACGT AATCTTTTCA CTTCCGTTTC GGTAGATGAG ATGGCAAGAG 
    AATT

AT1G66630.1

Model type
Protein coding
Short Description
Protein with RING/U-box and TRAF-like domains
Computational Description
Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Zinc finger, SIAH-type (InterPro:IPR013010), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT1G66620.1); Has 1705 Blast hits to 1696 proteins in 709 species: Archae - 0; Bacteria - 0; Metazoa - 1145; Fungi - 28; Plants - 467; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR