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12-2722-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30276106 [Map]; Strand: c
      • AT1G80520.1 - [+] show detail - Sterile alpha motif (SAM) domain-containing protein
        Distance: -375; Region: promoter
    Flanking Genome Sequence: 12-2722-1 - 5-prime edge 
    GCTGTAGGAA ATGGAGCACA TTATGCTTCT TTTTTTGGGA TCACACTATC 
    TCTAATAGAG ATTCTCTATC ATCTTTGTTC CATTTACTAT TCAAATATAT 
    ATGGGTAAAA CCGAATATAT TACAGTAATA AACNTTGCAC CCAACACAAA 
    TTTTGCTTTG GATTGAACTA TATTTTCAAT TTAATTGAAA AAAAAAANAT 
    AANGANAGCG GNTAATNCTC NATCTTAAAA CNCATNTNCC CATNCAANGA 
    AAATTNCCGG GACNTCAAAA TNTTTAAAAA AAAATAAATN TAATTCNGAN 
    GGCCATATAN ATNTNTTATA GTNTTATNGG CNTNTTCCGC TGTCTACGNG 
    ATCAAATNAA TTAANCAANG TNNCTTNTTN GTNTNAAGTA AAATNAANGC 
    CTTNTNTTCG TTNCCAAATN AATTANCTAA ATAGTTAGTN TTATCTTNGT 
    AGTTNGGNCA NCTAANGATA NCAAAAAAAA NCTNCTNNNA ACCTTAAAAN 
    CCACCTTNTT NNGGAGCCAA CTAANANNTT GGGGGTNTNA ATNCGGGNAN 
    ANAAAAACAT AACTTNNATG GGNNTTTNTN NTTAAAGNCA NTGAACCCAA 
    TCNAATTTTT NAAAGATNNN CCCNANNNGG GNTTTTTAAN TTANNCGGAA 
    NAAAATTTTT TTGGGGGNTT NNAGGGGGAC TTTCNANCCN TTTTTTTCGN 
    GGGCNGGGAA NCCAANNACN TCNCCCNAGN GGNGGGGGGG GC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30276222 [Map]; Strand: c
      • AT1G80520.1 - [+] show detail - Sterile alpha motif (SAM) domain-containing protein
        Distance: -259; Region: promoter
    Flanking Genome Sequence: 12-2722-1 - 3-prime edge 
    CCTACAGCGT GATTAATGGA CAAACCCTCA CTCAGTCATC TCCATGTGTT 
    GCATCCTTTT TCATTTTTCT TCAATGCTAA AAGATGTGTG AACTTCTCTT 
    TATCATTTTC TTCTTCTTTT TTTTTACTTT GGTCCACTTT AGCCCATCCG 
    TTCACCCACC TTACTAAGCA AGCCCCGAAA CTTTTGAAAA AGTCAAAAAC 
    AACCCCAAAC CGTCTCACTC CTTTCCTTTA TATATACTCC AAACGACTTT 
    ACCTTCCAAA ACCACACACT CTCACCAAAC GTTCTACAGA TTCGTAAATC 
    TCATAAACAT TATGGATTGG TTCTCATGGC TCTCGANAAC AAATCTCGAA 
    GCT

AT1G80520.1

Model type
Protein coding
Short Description
Sterile alpha motif (SAM) domain-containing protein
Computational Description
Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR