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12-2752-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 533634 [Map]; Strand: c
      • AT4G01270.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 12-2752-1 - 3-prime edge 
    TGAAAACGGT AGACTACAGC AGTGTAATCC GATTAAAAAA GATTAATTTG 
    ACCTTCAGTG ACTTATGAAA TGGTGATTTA CCTTAGTTCA TTCGTAACAA 
    CAACTTGTTA AACTGAAATT ACGAAATTTC ATAAGTAGGT ATGGTGAAGA 
    ATTTGAGGAA AGGAGGATTG AACATTGCGT TTCTTTTCTC TTAGGTCTTT 
    GAATTTTCTT TTATGAAGTC TCTAATAAAA AACAATCTTT CTTACTCTGA 
    CAGGAGTTAT AAGGAATTGC TAGCCAAGTG CAATCAGCTG GGAAGAGGCG 
    AAGCACGATC TTCTGAGAAA CTTGAAAAAG CT

AT4G01270.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink).
Link
InterPro Scan - TAIR