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12-2923-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13069364 [Map]; Strand: c
      • AT4G25620.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-2923-1 - 5-prime edge 
    NNCGCAACGC GCCCCACGTA NAGCCTCCCG CTCCGAGCAG CGGANNANCA 
    NCACCGGGCT GGGAGACCAA GANNGGGNNA NAGANANGTG ANGAACANAG 
    CGGAGNGGCT ATNGGAATGT CCNGAGCNGG TCTNGAGCTA TGAGGAGCGT 
    TAATAATAGT AGTGTCGACA CCGTGAACGC CGCCGCTTCC GCCATCGTCT 
    CCGCTGAGTC TAGAACACAA CCGTCGTCGG TTCAGGTACT TCTATGAGCT 
    CTTTTTTTTT TTTGANAGGN AAAAGGGTNA AANNNGGGNG GNTTTTTTTN 
    TNNAAAAAAA AAAAGGGGGN AANTTTNNAT CNNANAGANN TNNGNNGNNA 
    NTNNNGNNAG GAGANNNGAG GGGNGNAGAA AGANGGNGGG NNNAATTNAN 
    AAANNNNNAN AANTNTNANG ACGNNNGNNA NANNGNNGNG NGGNGACGGC 
    GCGGNNGTTA CGGAGNGGAN NGNNTGGGGN NNNNGNNGNG GGAGNNACGN 
    GANNGNNGNN GAAGGNNANA GAGAGNGANA TNCGGGANAT GGGGGNGANG 
    GGGANNNGGN GGAAAGGGGG CNGAAGGNNN GNGNGATNCG GTGNGNAGGG 
    GGAAAGANNA GNNNNNNAAA AACNNTGAAA NGGGAGGANA ATACNANCGN 
    AGGGCGACGG GAAAANNNGN NATANNGANC GANNNNCGAA ANNCGNAGNN 
    GAANGNNANA NANNGAGNGC GNANANANNA TNNAATGGNG ANNGAAAG

AT4G25620.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 940 Blast hits to 722 proteins in 169 species: Archae - 0; Bacteria - 80; Metazoa - 158; Fungi - 130; Plants - 239; Viruses - 59; Other Eukaryotes - 274 (source: NCBI BLink).
Link
InterPro Scan - TAIR