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12-3201-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22337568 [Map]; Strand: w
      • AT3G60420.3 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (3UTR)
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: -225; Region: promoter
    Flanking Genome Sequence: 12-3201-1 - 3-prime edge 
    CTTAGCTAAC CAGTTTATGT ATTTAAAAGT ATGTTGATGT AAATAAATTT 
    AGAAAATCAG AGGTTAATCG ACAACAAAAC CAAACCGCAA TCAAAAATTT 
    GAAACAATTG AGAATAGATA AATAATGGTG ATGATAATAT CTTTTATTTG 
    AATTTAAAAT TACTAAGTGA AGGCAAATTC TGAACCAAAA TAAAAAAAAA 
    TCAGAGATTT CAATATAGAC TGAATCAGTC AAGCGACGGC TAACGCCGGT 
    TTTATCCGGT TCGTAGGGAT CATACGAAGA CAATGACAAA ATTAACCGGA 
    GTTGGAGGGA GGGTACATGA TACCATCTTG ACCATGACTT GTAACGACTT 
    CAAAATCTCC AACTTCACTA GAGGAGATCT GTCTTTGTAG TTCAACACAA 
    GCACAAAAAT CTAACCTGTG CGTTGCCTCT TTATAGAATG TGGCATATGT 
    AAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22337683 [Map]; Strand: w
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: -110; Region: promoter
    Flanking Genome Sequence: 12-3201-1 - 5-prime edge 
    GNNGTAANTA TCAANNNATN AANCATNGGG GNNANNAGTC GNGGANNANC 
    NTTCANATTC NNGGACCNGA NAAATNCCCA AGGGCATGAT CTTGTANTTN 
    CCGGTTTAGC CGGTTTTGTC CATTACGATG ATGTTAAAAA AAAGTTGTTT 
    TTATAAAACA TAGAAAGAGA AGAAACAGAA ATTAAAAAAT AAAATTAAAA 
    AAGCGCCATG TATACAACAA TCACTTCCAA CGTAGTCTCA AAGGTCACAG 
    CAGCAGCAGC AACAATCAGA GCAACAATGG AGTCTGCTAA GTCAAAAAAT 
    CCCGATAGCT ACCAAAATAT CTTGATGATG CGTCACGGNG ATCGCATTGA 
    CAAAATCGAT CCACTCTGGN TTGATACAGC TGCGANACCT TGGGATN

AT3G60420.3

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60440.1).
Link
InterPro Scan - TAIR

AT3G60440.1

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 266 Blast hits to 262 proteins in 108 species: Archae - 0; Bacteria - 57; Metazoa - 8; Fungi - 71; Plants - 68; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR