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12-3212-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 416343 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 163; Region: intergenic
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: -2094; Region: intergenic
    Flanking Genome Sequence: 12-3212-1 - 5-prime edge 
    NTTTGNGCTG CCTTAATTTT CTTTTGTTAA ATTATTCAAA AACAGAAACC 
    TAAAAGAACT CTTCAAAATC TGTTTATCAT CACAAATTCA GTTCTTGATT 
    ACCTCAAGAA AACAACACCA ATTGAGATCT CATGCNTTAA CAAGTCTTTT 
    ACAACATAAC CAAAAATCAT ACNTGATACA TTCTGAAGTA AACTTTAAAG 
    CAATAGAAAA AATCATTTTT GTCTCTTACA AAGTTAATCA ACGAGGATCT 
    AACTCCGTAA TTGTAACATC ATTCAAAGAC GCAATACGCG GGTTTCTTGT 
    ATGATTGTTG TCTCTTGACG ATGAGTCTAC AACTCCTGAG TAAAAAGCGG 
    GTTGCAAGGG TCTCGGTAAA GTGAAAGAAT TTGCATTGAG CATTCTAACA 
    ATAGAAGCCA TTGTTGGTCT ACTCCCTGGA TTCTCCTGAA CACACAACAA 
    ACCAATGTGA ATGCATTTCC TGATCTCATC ACTTAGACCT CTTGTTTCAA 
    TCAAACTTGG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 416459 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 279; Region: intergenic
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: -1978; Region: intergenic
    Flanking Genome Sequence: 12-3212-1 - 3-prime edge 
    GCACAAAGGC CCAAACGACA GTTGTGCAAT GTGATGGAGT CGATTTGAAC 
    GAGCACATAG ACAAGAAACA AAAGATGAAA GAAGTGAAAA TGAAGGTTCC 
    AAATAAACTT AATTAAAGAG TTTATCCTCA GAGTCAGAGT GTAAGCTACN 
    TTTATTTTGG AAACTTTCTT CCATGTCCAG AGTCTCGTTA TCATCCCTCC 
    ACTTATCAAT TTCAGAAAAC CAAAGAACCA TGGAGGGAAT CAAGAGAGAT 
    CATAAAAGAG AAATCAAATG TGAATTATAG GGAAAAAGAA TGATGGACGA 
    CATAAAAGGG GAAAAAAGAA CTTGATCAAT CAAGAATATG GCTCAAAGAG 
    AATCATTTCA AATCAGAGAA CAAAAAAAAG GTCAGCAATA AAACCNTTNN 
    TTGNTCANNN NTNCNNATNN TNNNNNNNNN TNNNNNA

AT4G00960.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (TAIR:AT4G00970.1); Has 115688 Blast hits to 114341 proteins in 4243 species: Archae - 87; Bacteria - 12866; Metazoa - 42714; Fungi - 9727; Plants - 32895; Viruses - 425; Other Eukaryotes - 16974 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR