1. Home
  2. Mutant Lines
  3. 12-3647-1

12-3647-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13860661 [Map]; Strand: w
      • AT4G27820.1 - [+] show detail - beta glucosidase 9
        Distance: -90; Region: promoter
    Flanking Genome Sequence: 12-3647-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATC ACGAGTGGGA GAAGGAAAGG AAAAGCTCGA 
    TGCTTCTCTT TTTCAATGGT CCAATGATTT ATTCACTTAC AATTATTTAT 
    TCACTTCAAC TTCTCAGACT ATAGGACGTC CTAAAAATAA AAATGAAACC 
    TTTCTCTAGA GTGTTCATTA TTTTGGTCAT CGTTTTGTTA ACAAGCTACA 
    TAGATGCCTT TACCAGAAAC GATTTTCCAG AGGATTTTCT CTTCGGAGCT 
    GCCACTTCTG CTTATCAGGT TCTGTGTTCT TCATTTCTTT TGTCTAAAAA 
    AAGATAGTTT TCGTGATGTT GGAAATTTCG TTGAAATAGT GGGAAGGAGC 
    TGTTGATGAA GATGGAAGAA CTCCTAGCGT CTGGGACACG ACCTCTCACT 
    GTTGTAAGCT

AT4G27820.1

Model type
Protein coding
Short Description
beta glucosidase 9
Computational Description
beta glucosidase 9 (BGLU9); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 11131 Blast hits to 10798 proteins in 1457 species: Archae - 142; Bacteria - 7630; Metazoa - 718; Fungi - 199; Plants - 1452; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink).
Link
InterPro Scan - TAIR