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12-3846-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12132726 [Map]; Strand: w
      • AT1G33440.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -2319; Region: intergenic
      • AT1G33450.1 - [+] show detail - transposable element gene
        Distance: -6502; Region: intergenic
    Flanking Genome Sequence: 12-3846-1 - 5-prime edge 
    NTTATNCNNG NAAGAANAAT GCCTNGANTN AGGAGGNAAC NTCNGANTAN 
    TNGNNATGAA CCACCTCGNA GCCCTNNTNT CACGGTGCAA CAGCCAAGGA 
    AAGCCTACCA NNCCGGGCCG NANACCAGGG GNGCCCGAAT ATGAAAACGA 
    ATGAAGAGAC GTGTGACATG TTCTCTGATG TATAAACTTA TGTAATGGAT 
    ACAACTGTAC CCCAAAACTT CACTAAATCT ACAATAGAAT GCACACTGTC 
    AACTACATGA CCTTCCCTTG ATCTTTTATA TTTTAATCTC AAGCCGTTTA 
    TATACATTTA TTTTCGTTCA CTATAAACCC TTTTGTTGGC ATGACATACT 
    AACAATTTAA ACATCCATAA TGCCTTTGTG CATATGCGAC CAAATTCAAT 
    NATGTATATT CCCATTCGAC CAAATAAAAC TATTTACAAC CAATAATAAT 
    GATTTCTCTT CTTCTTTGAA TT

AT1G33440.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G59740.1); Has 6684 Blast hits to 6582 proteins in 1312 species: Archae - 0; Bacteria - 3263; Metazoa - 486; Fungi - 360; Plants - 2166; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G33450.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04780.2); similar to hypothetical protein 26.t00076 [Brassica oleracea] (GB:ABD65021.1)
Link
InterPro Scan - TAIR