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12-3884-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 416969 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 789; Region: intergenic
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: -1468; Region: intergenic
    Flanking Genome Sequence: 12-3884-1 - 5-prime edge 
    AACACATGGA NCAAAAAAAG GTCAGCAATA AAACCATTAA TTGATGNAAN 
    CTACAGATGC TAGGNGTAAA CCAAATCTAC AGACTCTCGA AAGTGAATGT 
    GTGTGCTTGC TATATGTGCA NCAGAGTTAT TTTCTTGAAA NAACACATGG 
    AAGTGTAAAC CATTTTGCAG TGTGCTTGTN CTTAAANCGN ACTACATNGG 
    GTACCATGGA AACTNAGAAT CTGTNGATNA GATCAATAAN NGGTGTTATT 
    GCGNGACCTT GTTTGGNTCT CTGGGNGGNA NNGANNNTNT TGGNGNCGTG 
    NGNTGGNTNG AGNTGGGCCT GGGGTCCCCT TGGGNGGGGT NCGTNTGNGN 
    NNNTNCNGNN NGGTGCACAN NGGGGTTANC NTNTTGANNN NGGNGGTTTC 
    CNTTNANGGN TNTTTNGGGN NTCNGNAANN GNNAAGNGGG GGGGGGTTAA 
    CGGGGNNTCN GNGAGGGGGG AGGANGGNNG TCANGGANNA TNTGGNNNGA 
    GGCCTNNAGG CCNTGAGGNN AGACANCGNN TNTNNNNGNG GGGGGGGGGG 
    NCGANNTTNC ANCTNTAAGG GAGGTGGGGG GNNCCGANTN TGTGAGGNTG 
    GTGGCTTTTN NTTGGGNAGG GGNGGGGACC CNTGGNANGN NNGGGNNNGT 
    GCNNCGTNGT GNNGNNCGTG TTTGNGGGGG NNCGNGNNNC NCCGNGNNGG 
    GGGTGGGGGG GGGAGGTNNG GNGCGAAAAG NNNCANAGNN CNGTANGGNN 
    AGNACG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 417006 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 826; Region: intergenic
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: -1431; Region: intergenic
    Flanking Genome Sequence: 12-3884-1 - 3-prime edge 
    CATGTGTTTA CACTTTCGAG ATATAAAGAA AGATAAGAAA CAACATATAT 
    ACATTAAGTT ACAGACAATT TTACGAGATC AAAGGAAATA AAGGATATTT 
    AAGCAAGGCA TATGGATGAA AATAATATGT TTAGCAAATG AGTAAAGCAA 
    TTAACAAATT CAAATCAAAT AAATCTATCC CAAATCGTAA ATCTAAGTTA 
    AGCCTATAAA AAACTAAAAG CTAGATGGAA TATTTAGAAG TGAGAAGATG 
    AAACATAAAG AGAAAAATAA GGAGGCAAAG TCAAAGACTT AAACGCAATG 
    AGAAAAAAAG GAACGTTGGT ATTTTGTTGG GCCTTAGGCC ATCTCCAATG 
    CAGGGTTCTC TACTATAATT TGATAGGGTT CTCTGCTATT TGTTGATTAA 
    AAGAAAATCA AAACAAAATT TTTTCAAGAG AGGCGACTCT CTGAAGAGAG 
    TTTTGGGAAC TTGAGAGAGG CGCAGACGTG GCATGTCGTG ATTTACTAAT 
    TATTTTAACA AAAGGAAAAA AATGTTGNGT GTTTTCATTT CTCTCTCTTT 
    TTTTTTTTTT NGGGNNAAAN GGNNNGNAAA AATTTNTTTT TTTTTNGGGN 
    CCNNGGGGNN AAAANNGGGG NANTTTNTNA ANTTNTCCAA NTNNGGGGGG 
    NNNANNNNNG GGGGGGGGGG GGGGNTTNNA AAAANGGGGG NNGGGGGNNT 
    NNTANCCNNN NTNNNAAAAN NNNAANNTTT TTTNNANAAN NAAG

AT4G00960.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (TAIR:AT4G00970.1); Has 115688 Blast hits to 114341 proteins in 4243 species: Archae - 87; Bacteria - 12866; Metazoa - 42714; Fungi - 9727; Plants - 32895; Viruses - 425; Other Eukaryotes - 16974 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR