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Mutant Lines
12-4082-1

12-4082-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 21882507 [Map]; Strand: c
- AT3G59180.1 - [+] show detail - Protein with RNI-like/FBD-like domains
  Distance: 48; Region: intergenic
- AT3G59190.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: -2020; Region: intergenic

GGGNTAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTAAAACTA AAAACTAAAG CTTTGCTAAT CTTCTCTGCG 
ATGGGAAAAA GAACAATCTT TAAACCGGAA AGGTGTTGTT GAGGAAGACG 
AGTCCACTTG TTGATGAGGA AGAGTGCACA GTAGATGAGT AGCNTGATGT 
TATCAGAGAT AACNTTGAAT CTTGCATTTA GGTGAGGCTA CTTTTTCAAG 
CATCTGAAGT TCAGTTGATA ATATACTCAG ATCATCATCA AATGGAGTAT 
CGTAGTATAA TATCACTTGT TCGAGATTCG GCATTGTCTC CAAGAAGTAT 
TTAATCACCT CCGTCTGCCT ATCCATGTCA TCTTTGTAAC TAGTGACTTC 
TCCAAACTTC AATACCTCTA GAATCTTCAC CGAACTTGAT GATAGACAGA 
TAGGAGTCGC TTCCCAAGGC TTGCACATAC ACATGTCTGC ATCCTCTTCA 
AAACATTTGT TTGTGTCTTT GAAGCGGTAT CTCTCGTCCC AACATTGATT 
TGTATCTCTG TAATGAAGTC CCTGAAGTAT AATCAAGGAA ATAGCTTTTC 
ANAATTTACA TGTGTTTGGA AATAATGTAN CANCTGATGA AGGAAAAGGA 
TATGTGCTGG TNCTTTGAAN ATGATAGTTT CTANATTTGG ACAATTCTCN 
ACCTAACCGN NNAAAACCCT NGGTTTCANN CGGANCTNNA TGATGTGGNG 
GCNAGGNGCC A

3 prime edge [+] show sequence

Chromosome: 3; Position: 21882570 [Map]; Strand: c
- AT3G59180.1 - [+] show detail - Protein with RNI-like/FBD-like domains
  Distance: 111; Region: intergenic
- AT3G59190.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: -1957; Region: intergenic

CTTAAAACAA CAATGACAAT ATATAGCTTG GTTTATGTTC TGTTATTTGG 
TGTCTTATGC CCTTCCAGTA GGTTCGTAGA TTACATCTGT TTTATCATAC 
GCCGTCTAAG TAGAGATGTT GTGGTGGGTA AAAAAGCTCA GCCCGACCTG 
AACCCAAAAT AACCCCGTCC ACCAAAAACC CAACTTTTAA AAACCCAAAT 
GGGGTTTTGA TTTAGNGGGG NAAGNCCCNA AAAAACTGGA TGGTCCCNNA 
CTCCNCTGGG NCCCCACCTN GGGTTTTTNN NATTTTTTTN AAAGTTNNGG 
TTAACCGGGG AAAANCCCNT TTTANGGGNG NGGGGGGANT NAANTTTNNG 
GCTTNAAAAA TTTTTTAAAA NTNNTTTTTT TTTTNGGGTT TCCCAATTNT 
TTTGNNGGGG GAAAAAAGGG NNNNNTCNCN TTTTTTGGGG AAAAAAATNA 
AAANANTNNG TTTTTNGGGG GNAAAAATNN AAAAANCTTT TTTNTNGGGC 
GAAAAAAANA NAAANNANCT NTTTTTTTNG GGGNNAAAAA NNAAAAAANN 
NNNTTTTTNT NNNGAAAAAA AAAANAAATT TTTTTNNGNA AAAAAAAANA 
ANNNNTNTTN TTTTNGGGGN NAAAAAAAAA AAAAANNNNN TTTTTCNGAA 
AAAAAAAAAA AAAANANNTT TTNNNGGGGG NAAAAAAAAA AAANAATTTN 
TTTCNGGGGN GAGAAAAANA AAAANNANTG TNCCANAAAA AAAA

AT3G59180.1

Model type: Protein coding
Short Description: Protein with RNI-like/FBD-like domains
Computational Description: Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G59210.4); Has 885 Blast hits to 857 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 885; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G59190.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G14103.2); Has 1982 Blast hits to 1934 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR