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12-4194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29979286 [Map]; Strand: w
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4194-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCATG AACAGAGTTA GGATAGAGAG TAGAACAGAG 
    AAAAAAAGTC TCCTTCTCTT CATTTTTTTT TTCTCTAANG ACTTTNATGT 
    NTGAAAGTNC TNTTTNAAAA ATTATNGACC CGNCNCGTNG GAATTGGGAA 
    GTNCTNTTTN GNCANCGGNC ANGGGATCAA TTNTCATTNC ANGTTNNCCC 
    ANCTNATNGC CCAAANCAAT TTNGNAATTT TNCATAATNA NAANCTNAAT 
    TTNAGTTNTN CAATTTNNCT ATCATTTTTT TNCCCAAANN ATNTANCAAN 
    GTGGATTNTN CCCNTANATT NTTANTNNCN GGAANTGGNC TTTNCCCCAC 
    CCCAAATNNT NCNTNNGNGG NCANGGGAAA AGTGGNCTNT NTNANTTNTN 
    AANCNAAGGG ANCCTTTNCN TNAGCCNAAA TTNNNAAATT NNGTGGGTNA 
    NGGTCCCNTC NCNTGGCCAN TNANCANANT TNNNGTTAAN CCNAAANNAA 
    TGGGCCNTNG AGNCNANNNG GATTAAGGTN CANCANGATC CANGANCNGN 
    CCGGNTTCNC AAAATNCTCA TATAATGGNN GNATAAATTT TTTTTTAAAA 
    CCAGNCTCAC CGGTTTNAGG TTNGGGCCNN NTTTATTTTT GTAAAANANC 
    CCTTGCCCNA AAAACAAANN CNGGNNAAAA TNCGGGAANA NTTNTGGCCA 
    AATTTTGGAN NAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29979239 [Map]; Strand: w
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4194-1 - 3-prime edge 
    TGCAGTTCAT CAATGGTCCT TTGATAACGA CAGCTCAATC TCCACCTTCT 
    TCTTCAACTT CATGTAACCG TATCTGTGGA GGAATCGAGA TTCCTTTTCC 
    TTTTGGAATC GGACGAAGAG ACTGTTTTCT CAACGACTGG TACGAGGTTG 
    TCTGTAACAG CACCACCTCC GGTAAATCCT TAGCTCCGTT CCTCTATAAG 
    ATCAACAGAG AATTAGTTAG CATCACTCTT CGAAGCAGCA TCGACAGTTC 
    CTACGGAGTT GTTCACATTA AATCTCCGGT GACTTCCTCC GGCTGTTCTC 
    AACGACCCGT AAAGCCTCTT CCTTTAAACC TCACCGGTAA AGGAAGTCCC 
    TTTTTCATCA CCGACTCGAA TCGTCTCGTC TCAGTTGGTT GTGACAACAG 
    AGCATTGATT ACAGACATCG AATCTCAGAT CACAGGATGC GAATCGAGCT 
    GCGACGGAGA TAAGAGTCGT TTAGACAAGA TC

AT1G79670.1

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120817 Blast hits to 119164 proteins in 4285 species: Archae - 142; Bacteria - 13548; Metazoa - 44699; Fungi - 10352; Plants - 33861; Viruses - 488; Other Eukaryotes - 17727 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79670.2

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120550 Blast hits to 118930 proteins in 4262 species: Archae - 142; Bacteria - 13516; Metazoa - 44650; Fungi - 10334; Plants - 33695; Viruses - 488; Other Eukaryotes - 17725 (source: NCBI BLink).
Link
InterPro Scan - TAIR