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12-4222-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22723130 [Map]; Strand: c
      • AT1G61580.1 - [+] show detail - R-protein L3 B
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-4222-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AATATCGCCG ACTCAAGGTA CACAAACCTT 
    CTCTTGATTC TTTCGATCTT GCTTCAGGAA TCAGGACACT GGTTCATCTC 
    TTACCTCATA TGATTTTCAT CATTAAATTT CAATTTATGT GCGCNTTTGT 
    CTCTTAAATT TTCGTAATTT GCCTTGGTTG ATCATAGTTT CACATTCTCT 
    AGCTGCTTAA GTTTTGTAGT ATGTTGTAAA AATGTGTGTT TTGAATATGA 
    TATGCTCTGA AGGTAGTTCT GGTTTATGAT TCAAAATGAG AACCCTCGGA 
    GATACTTTAT AAAATCAAGG CCGGAGTCTC TGAATCAGCT CTTTTGCTAG 
    AATCCAGATT TATCTGGTTT TTTAGTGAGA AACACTCTTA TAGAGCTTGA 
    GATTTGGTTG TCTTAAATGA TACCATCGGC CTTTGATCGA GGGAACATTT 
    CGTTTCATTT TTCCAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22745654 [Map]; Strand: c
      • AT1G61630.1 - [+] show detail - equilibrative nucleoside transporter 7
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 12-4222-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATTATG 
    CACCGGTTCT AGTAGCCATG TACAACGGGT GGGATGCGAT ATCGAGGTTC 
    ATTCCCTCGA TCAAACCGTT AGCAATGGAG TCTAGGAAAT GGATCACGGT 
    CTGCGTTGTG GCACGTCTTT TGCTCGTTCC GGCCTTTTAC TTTACTGCTA 
    AATACGCAGA TCAAGGATGG ATGCTTTTCC TCACCTCTTT CTTGGGATTG 
    AGTAACGGTT ATTTAACCGT TTGTATCTTC AGCACTGCAC CAAAGGGCTA 
    CAATGTAAGT TACTTCTCTC CTTACAAAAC TCAACCTCGG NTCGATTTGG 
    TTTAATATTT GATCGGTTAT GTTAATTTGG TTCGATCAAA TTTGTATAGG 
    GACCGGAAGC AAATGCATTA GGGAATTNGA TGTGTGTGTT TCTATTGGGA 
    GGGATCTTCG CTGGAGTTTG TTTGGGTTGG CTTTGGCTCA TTGGCAACGA 
    TTCGTTTTAG AGATCATATA ACTATTTTCT TTTCTTTTTT GCTGCCAAGC 
    GCAAAATTAT TAAAATTCAG CTCATTACGT TTAACGGTTG AATGTGTTTT 
    TTGACATTAA TTCTTCAGGG TTTTGTCTAA AATTTATTTT TATTNCTATN 
    GTAACTAGTG TGGATGAAAC AAGNTATGTT CAGTTGAGTT TATTTTTTTN 
    CANANGANGG NNAAATATTT ATANGNCGAA TGAATTTAAA AATTTTATTA 
    CTGG

AT1G61580.1

Model type
Protein coding
Short Description
R-protein L3 B
Computational Description
R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61630.1

Model type
Protein coding
Short Description
equilibrative nucleoside transporter 7
Computational Description
equilibrative nucleoside transporter 7 (ENT7); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: petal, leaf whorl, sperm cell, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 936 Blast hits to 904 proteins in 182 species: Archae - 0; Bacteria - 2; Metazoa - 417; Fungi - 105; Plants - 210; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink).
Link
InterPro Scan - TAIR